Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02503 ATGGGTAAACTATTTTGTGCTACCACAATTACTCTAATTTTATTGCTTAATTTCCACATCCCAGAAACAAAATCTCAACAAGACTATCTAGACAACCATCAACTAGATTGTGATGACCCCTTCAACTCTACATATGGTAATATCTGCAACAGCATCAAGTCCTGTCAATCTTACCTCACCTTTAAATCAAGTCCTCCTTTGTACAACACTCCAGCCACCATAGCCTATCTCTTGAATTCCACAGTCCCTCTCATAACCAATGCTAACAATATCTCAGATGTGGACCTTATTCCTGTCGACACCATGATCACTGTCCCTGTGACCTGCTTTTGTTCTGGTCACTACTATCAGCATAATTCCTCATACATCTTGAAGAATGACTATGAAAACTACTTCACTCTAGCCAATAACACCTATGAGGCACTCACAACATGTCAGTCTCTTGATGCTCAGAATATATATGGACTTGACAACCTCACTGTAGGGCTCAATTTGCATGTTCCACTCAGGTGTGCTTGTCCCACTTCTAAGCAAATGGAAAATGGATTCAAGTATGTTCTTACATATTTGGTCTCTGAAGGAGAATATCCTGAACTTATTGCTGAGCTTTTTGGGGTTGATACACAAAGCGTCTTGGATGCAAACAAGCTTCATGAGGATTCTGTTATCTACTACTTCACTCCATTGATGGTGCCTCTAAAAGACAAGCCACCTACCAAGATACAAAGGACACTACCACCACCATCGGCACCACTGTCAAAACCTCCGGTGACTAATCTAGCTAGGAATAAAGATTCAAGCTTTTCTAAGAAATGGGTGATTGTTGGAAGTACTGTTGGAGCTGCATTTCTGCTTTTACTCATCTTTTCTTTGTTCTTTTTTTGCTTTTGTCATCGGCAAAAGAACAAAGTTTCCTTGTCTTCTGTAGCCACCGATTCTGTAGAAACCAAAATCACCACTGAGAAAGTCTCAAATACCGACACAAGCACAACCAACCCCTCCGTTTCTCTGTCTTCCGAAGGGCTTTGTTATGCTGCTGACTCTTTGACGGTGTATAACTTCGAGGAGCTGCATAAAGCAACGAGCTTTTTCAGTGAAGATAACAGAATAAAGGGTTCTTCAGTTTACCGAGCAAGCTTGAAGGGTGATGCTGCTGCAGTTAAGGTTCTCATAGGAGATGCCTCTGCAGAGATCAACATTCAAGGGAGAATCAGCCACGCCAACATAACAAGGCTCTCTGGGTTTTGTGTACACAAAGGAAGCACATACCTTGTCTACGAGTTTGTTGAGAATGGTTCTCTTGATAATTGGATTCATTTTAACAATCGCTTAAATTTTGTGGCTCTGACTTGGAGGCAAAGAGTTCAGATTATTCAGGATGTTGCTGATGCTTTGAATTACCTTCACAACTATGCCAACCCTTCACATATCCACAAGAATTTGATAAGTGGCAATGTTCTTTTGGATGGGAGTTTAAGAGGTAAACTGTGTAACTTTGGGTTAGCAAGAGTGGTGAATGATGATGATTTTGGAGAAGGGGGGTTCCAATTGACAAGGCACGTTGTAGGCACTCATGGTTACATGCCACCTGAGTATATTGAGAACGGTTTGATTAGTCCAAAGATGGATGTTTTTGCTTTTGGGGTTGTGATATTGGAGCTTCTTTCAGGAAAGGAAGCAATTGTTGGGGATACAAATGGTGAGGAGAAGCTGCTATCAGCTGCTGTGACTGAAGTACTTGAAGGTGATAATGTGAGGGAGAAACTTCATGCTTTTATGGATCCAACTTTGAGGGGTGATTACCCATTGGATATGGCATATTCCATGGCAGAGATTGCCAAATGCTGTGTTGCCCGTGACCACAACTTGCGTCCAAACATTTCTGAAGTTTTGGTTATTCTGTCTAAGATTCACTCTTCTTCACTAGATTGA 1932 0.4136 MGKLFCATTITLILLLNFHIPETKSQQDYLDNHQLDCDDPFNSTYGNICNSIKSCQSYLTFKSSPPLYNTPATIAYLLNSTVPLITNANNISDVDLIPVDTMITVPVTCFCSGHYYQHNSSYILKNDYENYFTLANNTYEALTTCQSLDAQNIYGLDNLTVGLNLHVPLRCACPTSKQMENGFKYVLTYLVSEGEYPELIAELFGVDTQSVLDANKLHEDSVIYYFTPLMVPLKDKPPTKIQRTLPPPSAPLSKPPVTNLARNKDSSFSKKWVIVGSTVGAAFLLLLIFSLFFFCFCHRQKNKVSLSSVATDSVETKITTEKVSNTDTSTTNPSVSLSSEGLCYAADSLTVYNFEELHKATSFFSEDNRIKGSSVYRASLKGDAAAVKVLIGDASAEINIQGRISHANITRLSGFCVHKGSTYLVYEFVENGSLDNWIHFNNRLNFVALTWRQRVQIIQDVADALNYLHNYANPSHIHKNLISGNVLLDGSLRGKLCNFGLARVVNDDDFGEGGFQLTRHVVGTHGYMPPEYIENGLISPKMDVFAFGVVILELLSGKEAIVGDTNGEEKLLSAAVTEVLEGDNVREKLHAFMDPTLRGDYPLDMAYSMAEIAKCCVARDHNLRPNISEVLVILSKIHSSSLD 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02503 643 ProSiteProfiles Protein kinase domain profile. 361 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02503 643 FunFam PTI1-like tyrosine-protein kinase 3 429 643 - -
Trre5g02503 643 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 641 - -
Trre5g02503 643 Pfam Protein kinase domain 393 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02503 643 SUPERFAMILY Protein kinase-like (PK-like) 337 631 IPR011009 -
Trre5g02503 643 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Trre5g02503 643 Gene3D Transferase(Phosphotransferase) domain 1 429 642 - -
Trre5g02503 643 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02503 Trre-Chr5 19482456 19484387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02503 7 643 Receptor kinase-like Gene Family AT2G33580 47.859 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre5g02503 Pkinase 1.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02503 - - tpra:123901277 1173.69