Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02493 ATGTTAACCTTCTTTCCCCTCCCATATGGTAGGATTGAATCAATTTTCATTAAGGACATCGTCGAAGATGTTTTGAAAAGAGTAAATCATAGACACCCATTTGAAGTTAATGATGAACTTGTTGGAATTGAGAAAAAGCATGAAGAAGTTGAATCATTAATGAAAATTGGATCGAATGATGTTAAAACGCTAGGACTATGGGGCATGGGTGGCATAGGAAAGACCACTCTAGCTAAAGATGTATATGCTAAATGGTCTTCTCAATTTGATCGTTGTTGTTTCCTCGAAAATGTAAGGGACGAATCTAACAGGTGTGGGCACCGTGTTGTACGTAACAAACTTTTTTCTACATTGTTGGAGCTTCGTCTTGATGCACCTTATGTAGAAACCCCAATTTTTATAAGAAAACTTGCATGTGAAAAAAGCTTCATTGTATTGGATGATGTGGCAACCTTAGAGCAAGCAGAAAATCTTAACATAGTTAATAGGTGCTTGGGCCCGGGTAGTAGAGTCATTGTTACAACTAGAAATAAGGAGATATGTAGTCAATTTGATGAATGTGAAATATATGATGTTGTTGTGAATTCGACGATAAAATCACACCAATGA 609 0.3645 MLTFFPLPYGRIESIFIKDIVEDVLKRVNHRHPFEVNDELVGIEKKHEEVESLMKIGSNDVKTLGLWGMGGIGKTTLAKDVYAKWSSQFDRCCFLENVRDESNRCGHRVVRNKLFSTLLELRLDAPYVETPIFIRKLACEKSFIVLDDVATLEQAENLNIVNRCLGPGSRVIVTTRNKEICSQFDECEIYDVVVNSTIKSHQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02493 202 Gene3D - 20 190 IPR027417 -
Trre5g02493 202 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 181 IPR044974 GO:0006952
Trre5g02493 202 PRINTS Disease resistance protein signature 136 150 - -
Trre5g02493 202 PRINTS Disease resistance protein signature 63 78 - -
Trre5g02493 202 Pfam NB-ARC domain 50 187 IPR002182 GO:0043531
Trre5g02493 202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02493 Trre-Chr5 19352657 19353265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02493 11 180 WRKY Transcription Factor Family AT4G12020 33.523 2.30e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02493 - - psat:127083478 265.388