Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02464 ATGTTGGTCATTTTAGTGTCTGAATCTGAATTCATCAAAGACATTGTTGAAAATATTTTGCAACGACTGAATCTCATACACCCAATTGAATTGAAGGGAGTGGTCGGAATTGAGGAAAATTGTGAAAGAGTTAAATCATTATTGAAAATGGACTCGAGAGAAGTTCGAGTGATTGGCATATGGGGAATGGGTGGCATAGGTAAGACCACCCTAGCTCTTGCTTTATATGCCGAATTGTTTTCTCAATTTGAAGGTCATTGCTTTTTGGCAAATGTAAGGGAACAAATAGAGAAGAATAGTATAGATTACTTGCGCAACAAGCTTTTTTCACAGCTGTTACAAGAAGAAAATCTTCATGTTATTGTACCAAAAGTTGAATATCATTGTGTGACCAATAGGCTTAGACGAAAAAAAGTTTTTATTGTTTTAGATGACGTTGCTACTTCAGAACAATTAGAAGATCTCATTAGTGATTATGATTGTTTGGGGCCGGGAAGCAGAGTGATTGTAACCACTAGAGATAAGCACATAATTAACCATGTTGATGATTATGAAGTCAAGGAATTGAACAAACACGACTCTCTTCGGCTTTTCTGTTTGAATGCATTCAAAGAAAAACATCTTAAAAGTGGATATGAAAAGCTCTCTGAAAGTGTAATAGCCTATTGCAAAGGCAATGCTTTGGCTTTAAAAGTTTTAGGTGCACGTCTTCGTTCAAGAAGTATAGAAGCGTGGAAAAGTGAATTGGAAAAGCTCAAGAAGATTCCAAACATGAAAATTCAAAATGTGTTGAAATTGAGTTGTGATGACTTAGATAGTGATCAACAAAATATATTCTTAGACATAGCATGCTTTGTCAAAGAAGAATCTAGAGATCGCGTAACAAATCTATTGGAAGCTTGTGGTTTCCAACCAGTTATTGGAATTGATAACCTCGTAGAAAAGTCTCTTGTAACCATTTCAAATAAGGGTACGATACAAATGCATGACTTAATACAAGAAATGGGCTGGAATATTGTTCATCAAGAATCCCCTAAAGACCCTGGAAGCAGAACTCGATTGTGGCTTCCCAATGAAGTGTATGATGTACTAAAATATAAAAAGGGAACTAAAGCAGTAGAAGGAATAACTTTAGATATGTCTAAAGTTGAGGATCTACATTTAAAGTCTAATTCCTTTACAGAAATGTCTGAGATGAGATTTCTCAAACTCTATTATGGAAAGTGCAACAGTACAAGTAATATATATCTTCCGGAAAACGGTATGGATTCATTGTCTGATAAACTGAGGTACCTTGAATGGCATAGATATTGTCTGAAGTCTTTGCCATCACAATTTAGTGGTAATTTGCTTGTTGAGCTTTCCATGCCTTACAGCAGCCTTCAAAAGCTTTGGGACGGAGTTCAGAATCTTGCAAATTTAAAGGAAATTGATCTTAGATTCAGCAATGAGTTGGTTGAGGTCCCAAACTTGTCTAAGGCTACGAATTTGGAATGGTTAGCACTTACTAGGTGTAGAAATTTGCGCGAAATCCATCCTTCCATTTTGTCTCTCAACAAGCTTAAAGATCTCGAATTAGAAGGTTGTACGAAGATTGAAAGATTTCGATCCGACAATCATTTAGATTCTCTTCAAACCATCCAACTCAGCAACTGCTCATCTCTGAAAGAATTCTCGGTCACTTCAAACAAACTCGAGAATCTGTGGTTAGATGGTACATCTATCCAAGAATTGCCCTCATCAATTTGGTGTTGCCAGAAACTGAAGATGATTGATCTTCACAATTGTGATAATCTTGTTGGTTTTGGGGAAAATAAAAACCATATAGAAATTGGATCTCTTAATACTCTGGTTCTTTCTGGCTGCAAAAAACTCAATGCATCAAATCTTTGTTTCAGCTTCAAAGCATGGCAATCAACTTTAACATCATTGGTTTTGGAAAATTGTTGCAATTTAGAGGCACTCCCTGATAGCATTGGTTTATTATCATCATTGCAATGCTTAAAACTAAGTGGAAGCAATGTTGAGAGATTGTCACCAAATATAAAAAATCTTCACAACCTTAAAGAGCTAAGGTTAGACAATTGCAAGAAACTCGTGTCTGTGTCTGTGTCTGAGCTTCCACCGTCGCTGACATTGTTTAGTGCTATTAACTGCATTTCATTAGTCTCGGACCTTACTACATTGGACATTCCTTTTGAACATAGAACTAAACCTCAACCATATCATCAATCTGTGATCTTCCCAGGAGGTCATGTTCCTAAGAGATTTAGTTTTCATTCCGAAGAAAATCATCATAACGGTTCAACTTCTTCAGTAACTATTACACATCTTCCTGAATCTGGTTTATATGGTTTAGTGTTTTGCATCATTCTTTCCGAGTCAATTGATCAGTACCGATACATTCAATGTTCTGTTTACCAAAATTCCAAAAGAATAGGTGTAAAATCTGCCTCTTTGCGTAATCTCGATATGCATTTGGTTATTGATCATGTGTTTCTTTGGTATCTTGATGTTGGGAGTGGTTCTAAAAACATTTCTTTGTATAGTCAAATACAAGAAAGTGGAGCATGGGATAGTCCTAACAACATATCCTTTGAATTTTTGGTTGAAAATGAGGAGGGAGAATGGACAACAGAGAGAATAAAGGGTTGTGGGGTGTTCCCACTTTATCACAATTTTAAAGAGATGAATGTGTTGCATGTTAGAACAATTGGAAGTGGTCATAAAAATGAAGAGAATGAGACTAAGAAATTGGATCAAACTATTGTGACTCACATTCAGGATGAAAAAGTGGACTCCAATAATACATCTTCCTCTCACATTTTTGTAGTTCCAACAGTAAATGGTTGCAAGACAAAACCACAAAGTTTGGAGGAACATGATTTCTTTACAAATACAAGTTCAATACCACAGAATCAATTTGACACTGCAAGAGCTTCCAACATGAATCCAAATCAGATCATTGAAATGGTGTCAAAAGAAAAAGACTTGATCAATCCGCAACTCGGACAAGATTCTTGGGATCCAATTTCAGAGCTAGAGAGTTTGTTATGTGACAGTTATGATTTGTCTCCCATGTGCACCGACTCAAAAAATGTTTCGGTACTCGAAGATCCAAATGTGGCAACAATTCTTGAAAATTTAGAGACCCTTTTCGAGACACCACTTGAAATTGTCTCTTCAGACAATGAAGTGAAGCAAAAGTTTCATCAAATTTTGGAACAACTTGGCCAATTTGAAAACCAAATCCCTATTAGGCTTCATCATGTTATTTACAAGTTAAGAACTTTCATTGAAGGGGTTGATGTAAGATTTGTGAATGCTCAAAAAGCTATACAAGATTATGATCAATTGCTTCAATCAAGGTCTCTTATATCAAAGACATTGGAAAATGGCAAAGCTAGAGTAAAGCAAAATAATTGTGAAATATCTCAAGGTAAAATACAATTTGAAAAGATCAATTCTGAGATTGTTGAATTAGAACAAAAATTAACTGGTCTTGTTGAGATTAGAGACAAGCTGAAGAGAGATTTGGAGCAATGTGAATTGATAAATAACAAGATTAAGACAGAGGTTGCACAAGATTTGGTTCCACAATGCAGGATTGTCTTAACAAATTTGAAAAAGTGTGAAACTTCTTACAAAGTGGACTGA 3657 0.3566 MLVILVSESEFIKDIVENILQRLNLIHPIELKGVVGIEENCERVKSLLKMDSREVRVIGIWGMGGIGKTTLALALYAELFSQFEGHCFLANVREQIEKNSIDYLRNKLFSQLLQEENLHVIVPKVEYHCVTNRLRRKKVFIVLDDVATSEQLEDLISDYDCLGPGSRVIVTTRDKHIINHVDDYEVKELNKHDSLRLFCLNAFKEKHLKSGYEKLSESVIAYCKGNALALKVLGARLRSRSIEAWKSELEKLKKIPNMKIQNVLKLSCDDLDSDQQNIFLDIACFVKEESRDRVTNLLEACGFQPVIGIDNLVEKSLVTISNKGTIQMHDLIQEMGWNIVHQESPKDPGSRTRLWLPNEVYDVLKYKKGTKAVEGITLDMSKVEDLHLKSNSFTEMSEMRFLKLYYGKCNSTSNIYLPENGMDSLSDKLRYLEWHRYCLKSLPSQFSGNLLVELSMPYSSLQKLWDGVQNLANLKEIDLRFSNELVEVPNLSKATNLEWLALTRCRNLREIHPSILSLNKLKDLELEGCTKIERFRSDNHLDSLQTIQLSNCSSLKEFSVTSNKLENLWLDGTSIQELPSSIWCCQKLKMIDLHNCDNLVGFGENKNHIEIGSLNTLVLSGCKKLNASNLCFSFKAWQSTLTSLVLENCCNLEALPDSIGLLSSLQCLKLSGSNVERLSPNIKNLHNLKELRLDNCKKLVSVSVSELPPSLTLFSAINCISLVSDLTTLDIPFEHRTKPQPYHQSVIFPGGHVPKRFSFHSEENHHNGSTSSVTITHLPESGLYGLVFCIILSESIDQYRYIQCSVYQNSKRIGVKSASLRNLDMHLVIDHVFLWYLDVGSGSKNISLYSQIQESGAWDSPNNISFEFLVENEEGEWTTERIKGCGVFPLYHNFKEMNVLHVRTIGSGHKNEENETKKLDQTIVTHIQDEKVDSNNTSSSHIFVVPTVNGCKTKPQSLEEHDFFTNTSSIPQNQFDTARASNMNPNQIIEMVSKEKDLINPQLGQDSWDPISELESLLCDSYDLSPMCTDSKNVSVLEDPNVATILENLETLFETPLEIVSSDNEVKQKFHQILEQLGQFENQIPIRLHHVIYKLRTFIEGVDVRFVNAQKAIQDYDQLLQSRSLISKTLENGKARVKQNNCEISQGKIQFEKINSEIVELEQKLTGLVEIRDKLKRDLEQCELINNKIKTEVAQDLVPQCRIVLTNLKKCETSYKVD 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02464 1218 Gene3D - 188 272 IPR042197 -
Trre5g02464 1218 Gene3D Ribonuclease Inhibitor 565 734 IPR032675 -
Trre5g02464 1218 Gene3D Ribonuclease Inhibitor 364 564 IPR032675 -
Trre5g02464 1218 Coils Coil 1144 1192 - -
Trre5g02464 1218 Pfam NB-ARC domain 38 256 IPR002182 GO:0043531
Trre5g02464 1218 Gene3D - 13 186 IPR027417 -
Trre5g02464 1218 PRINTS Disease resistance protein signature 539 555 - -
Trre5g02464 1218 PRINTS Disease resistance protein signature 223 237 - -
Trre5g02464 1218 PRINTS Disease resistance protein signature 133 147 - -
Trre5g02464 1218 PRINTS Disease resistance protein signature 57 72 - -
Trre5g02464 1218 Pfam Leucine Rich Repeat 451 469 IPR011713 -
Trre5g02464 1218 FunFam Disease resistance protein RPS4 370 563 - -
Trre5g02464 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 282 IPR027417 -
Trre5g02464 1218 SUPERFAMILY L domain-like 327 731 - -
Trre5g02464 1218 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 559 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02464 Trre-Chr5 19210735 19215407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02464 7 691 WRKY Transcription Factor Family AT4G12020 34.097 1.18e-98 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02464 - - mtr:25491119 1476.84