Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02460 ATGTTGTCCTACTACTACATTTTCTTTGCTATTTTCTTTCTCTCATTTTTCTTCAATAGAATAAGACTATCTTATAAATATCCAAAAAATCATACTTCACACTTCTCCACTTCTACTTACACCCCTCCTTCATACCCTATCATAGGTTGTCTTATATCTTTCTACAAAAACCGCGGTCGCCTTCTAGATTTTTACACTCATCACCTCTCTCAATCTCAGACTCAAACCATCCTCCTTAACCGCCTTGGTGCCCGGCGAACCATCATAACCGCCAACCCTCTTAATGTCGAATATATCCTAAAAACCAATTTTATCAACTTCCCTAAAGGAAAACCCTTCACTGAAATCCTTGGCGACCTTCTTGGTTGCGGTATATTCAACGTAGATGGTAATTTATGGTCAAAACAACGTAAATTAGCTAGCCATGAATTCACAACGAGGTCCCTGAAAGACTTTGTTGCGAAAACACTTGAAGATGAAGTTCAACATAGACTTATTCCATTGCTTGAATGGGCTTCTAATGGTAACCATGTTATTGACATGCAAGATGTTTTGAGGAGACTTGCGTTTGAAATTGTGTGTAAAGTTTCACTTGGTTATGATCCTTGTTGTTTAGATTTATCTAAACCTTTGCCACCTCTTTTGTCGGCGTTCGACAAAGCTTCTGAGATAAGCGCAATGCGCGCGGCTTCACCGGTTCATTTGATTTGGAAGATCAAGAGGATGCTTAATGTAGGGTCTGAGAAATCACTTAAAGAAGCTGTTAATCTCGTTCATGAATCGGTGAATGAGATAATAAGGAAGAAGAAAAAAGAAATTAGTGAAAAAAATAATATTGTTAGTGGGAGTGATTTGTTGACAAAATTGTTGGAGGCCGGGAATGATGAAATCATGGTCCGAGATATGGTTATTAGCATGATCATGGCGGGGAGAGACACCACATCGGCGGCTATGACATGGCTTCTTTGGTTGTTGTCAAAGAATCCAAGCAAAGAGGAATTGATAGTGAAAGGAGTGGGGGAAGTTTTTAGAGAAAAAAGTAATGATGAGTTTGAGTTAATGAGGTCTTTTGATTATGAAGGTTTGAAAGAAATGAAATATTTGAAAGCTTGTTTGTGTGAGTCAATGAGATTGTATCCACCGGTGGCATGGGATTCGAAGCATGCCACCAGGGATGACATGTTACCGGACGGAACTAGGATTGGAAAAGGCGATAGGGTGACTTATTTTCCATATGGGATGGGGAGGATGGAGGCTTTATGGGGAAAAGATTGGTACGAGTTTAAACCGGACCGGTGGTTCGATGAATCGGTGGGAGAAGTGGATAACAATGGAGTTTTGAAAGTTGTGAGTCCTTACAAGTTTTCGGTTTTTCAGGCTGGTCCAAGAGTTTGCCTTGGAAAAGATATGGCTTTTATTCAAATGCAATATGTTGTGGCTTCAATTCTAAATCGGTTTGAATTTAAGCCGGTGTCTGTTGACCAACCAATTTTTGTTCCTTTTCTTACTGCTTATATGGCTGGTGGGTTCAAAGTGAGAGTTCACAAAAGAGTTTCAAAATGA 1563 0.396 MLSYYYIFFAIFFLSFFFNRIRLSYKYPKNHTSHFSTSTYTPPSYPIIGCLISFYKNRGRLLDFYTHHLSQSQTQTILLNRLGARRTIITANPLNVEYILKTNFINFPKGKPFTEILGDLLGCGIFNVDGNLWSKQRKLASHEFTTRSLKDFVAKTLEDEVQHRLIPLLEWASNGNHVIDMQDVLRRLAFEIVCKVSLGYDPCCLDLSKPLPPLLSAFDKASEISAMRAASPVHLIWKIKRMLNVGSEKSLKEAVNLVHESVNEIIRKKKKEISEKNNIVSGSDLLTKLLEAGNDEIMVRDMVISMIMAGRDTTSAAMTWLLWLLSKNPSKEELIVKGVGEVFREKSNDEFELMRSFDYEGLKEMKYLKACLCESMRLYPPVAWDSKHATRDDMLPDGTRIGKGDRVTYFPYGMGRMEALWGKDWYEFKPDRWFDESVGEVDNNGVLKVVSPYKFSVFQAGPRVCLGKDMAFIQMQYVVASILNRFEFKPVSVDQPIFVPFLTAYMAGGFKVRVHKRVSK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02460 520 FunFam Cytochrome P450 33 520 - -
Trre5g02460 520 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 SUPERFAMILY Cytochrome P450 42 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 CDD CYP86A 82 510 - -
Trre5g02460 520 Pfam Cytochrome P450 42 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 Gene3D Cytochrome P450 35 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02460 520 PANTHER CYTOCHROME P450 33 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02460 Trre-Chr5 19165059 19166621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02460 38 517 Cytochrome P450 AT3G48520 61.042 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02460 K20665 - gmx:100800427 662.914