Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02426 ATGGATTTGAACACCCCAATACGATCCAACACCACGCCCCTCTCCAGCTCAGTCTTCAAATCTAAACTTATTTGCTTACAGGAATGGTGGCTCATGAAGCCTCAAAACCAGTGCAAGGGCTTAGCTCTTGCTGGCATTGCTTCAATGGAGAGAGAAAGAATGTTTTTTTCCTCTGTGATTGTAAAGAGACATGAACCCAATGTTGTAGAGACTGATGATGGCGTCACAATAATCTTCCGTGGTTTTATTAACTCGTCTCGTACATCTCAAAATGGATTTCCCTCCGATGTATGTCACCGGTTCTCTGTTGGATTTCCACACAATTGGAAAAATTATTCAGCTCACAGTTCAGGAAATGAATGTCAATATGTGGATAGAGTTACTGGTTTTGATGACTCAAATGCTTCTTCCCACAAAAAAACAGTTGATGAGACTTCTCATGAAGCTATGGAAGCCGAAGATAACGAGAATATTGCGAGTATTAAGTTGTCTCATCCGCAGGTTGGCGTGGTTTATAATCGTGAAAATAGATTCTCAGATGTTGATGACGTAAATGCTTCTTGCCACAAAAAGACAGCTGATGTGTCTTCACAGGAAGCTATCGAAGCTGAAGATAACAACAATATCGGGGGTCTTAAGTTATCTCAACCGCAGGTTGATTTGATTAATAATGGTGACCATGGAGTCTCAATTGCTGCTGCAGCCGAAAGTAATCAATCTTTGATGGGTGTGTTTGAATTTGATCCTATCCATGAGCAAAACAATGTTAGGTCTCCACTTTACCCAAAGAAATTGGAATTTGAACGGTTATCAAGTGATCGCAAGCAGAAAAAACGAAACAAAAAGATTGTAGAGGATACTAGTAGTTTGTGTAGTAGGGTCCTGACAAGAAGCATGGCCAAAAAAAGTTGCATGATGCTTAAAAGGGATGAGAAAGCTGAAGTAAAATCTTCTAGTTGTCCTGTTACAAGATCTAGCAGGGTACATAATTATAAAAATAAATGA 1005 0.396 MDLNTPIRSNTTPLSSSVFKSKLICLQEWWLMKPQNQCKGLALAGIASMERERMFFSSVIVKRHEPNVVETDDGVTIIFRGFINSSRTSQNGFPSDVCHRFSVGFPHNWKNYSAHSSGNECQYVDRVTGFDDSNASSHKKTVDETSHEAMEAEDNENIASIKLSHPQVGVVYNRENRFSDVDDVNASCHKKTADVSSQEAIEAEDNNNIGGLKLSQPQVDLINNGDHGVSIAAAAESNQSLMGVFEFDPIHEQNNVRSPLYPKKLEFERLSSDRKQKKRNKKIVEDTSSLCSRVLTRSMAKKSCMMLKRDEKAEVKSSSCPVTRSSRVHNYKNK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02426 334 MobiDBLite consensus disorder prediction 315 334 - -
Trre5g02426 334 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Trre5g02426 334 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 18 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02426 Trre-Chr5 18736969 18738620 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre5g02426 SANTA 8.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02426 - - tpra:123906974 479.174