Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02409 ATGAAAGAATTTGTTTTGTCTATCTTGATCTTCCTCATAATTCCAACACTAATAGCCGCAGAATGTACGTGCGATGAAGAAGATGAAGATAGAGACAAATCCAAAGCCCTACGTTACAAAATAGCTGCTTTAATATCGATACTAGTTGCAAGTGCAATTGGTGTTAGCATTCCACTTCTCGGAAAAGTGATACCCGCCTTAAGCCCCGAAAAAGATATATTTTTTATCATTAAAGCCTTTGCTGCCGGTGTGATATTGTCAACCGGTTTCATTCATGTACTTCCCGATGCTTTTGAGAATCTCACTTCACCTTGTTTAAAGGAACACCCTTGGGGAGATTTTCCATTCACTGGTTTCGTGGCTATGTGCACTGCTATGGGAACTCTTATGGTTGATACTTATGCGACTGCTTATTTTCAAAACCATTATAATAAAAAAGCACCTGCACAAGTTGAGAATCATGGTCATGGGTCAACCTCAGATGTGGAGAAGGATGCAAATCATGAGGGACATGTGAATGTTCATACTCATGCTTCACATGGTCATTCACATGGCCCTATTTCTTCGAATCCATCATCAGAACTTCTTCGTCATAGAGTTATATCACAGGTTTTGGAGTTGGGAATTATTGTTCACTCAGTCATAATAGGAATTTCTTTGGGTGCTTCAGAGAGTCCTAAAACCATAAGACCACTTGTAGCTGCGTTGACTTTTCATCAATTTTTTGAGGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAGTCTATCAATTACAATTATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGGATTGGAATTGGTATAGGGATCAGTAGTGTTTATGATGAGAACAGTCCAACCGCTCTTATTGTTGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATTTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGCTTAGATTAGGATGCAATCTATCTCTTCTACTAGGAGCTGGTTGTATGTCTCTTATAGCCAAATGGGCTTAG 1065 0.3934 MKEFVLSILIFLIIPTLIAAECTCDEEDEDRDKSKALRYKIAALISILVASAIGVSIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYNKKAPAQVENHGHGSTSDVEKDANHEGHVNVHTHASHGHSHGPISSNPSSELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITIMGLFFALTTPVGIGIGIGISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLIAKWA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02409 354 PANTHER ZINC/IRON TRANSPORTER 36 348 - -
Trre5g02409 354 Pfam ZIP Zinc transporter 38 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre5g02409 354 NCBIfam ZIP zinc/iron transport family 22 354 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02409 Trre-Chr5 18588653 18591110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02409 8 354 Inorganic Solute Cotransporters AT3G12750 56.286 3.38e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02409 K14709 - gmx:547695 541.191