Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02407 ATGGGATTTAAAATTAATATCAAAGAATTTATTTTGTCTATCTTGATCTTTCTCATAATCCCAACACTAATAGCCGCAGAATGTACGTGTGATGAAGAAGATGAAGATAGAGACAAATCCAAAGCCCTACGTTACAAAATAGCGGCTTTAGTATCGATACTAGTTGCAAGTGCAATTGGTGTTTGCATTCCACTTCTTGGAAAAGTGATACCTGCCTTAAGCCCCGAAAAAGATATATTTTTTATCATCAAAGCCTTTGCTGCCGGTGTGATATTGTCCACCGGTTTCATTCATGTACTTCCCGATGCTTTCGAGAATCTCACTTCACCTTGTTTAAATGAACATCCTTGGGGAGATTTTCCATTCACCGGTTTCATAGCTATGTGCACCGCTATGGGGACTCTTATGGTTGATACTTATGCCACTGCTTATTTTCAGAACCATTATACTAAAAAAGCACCGGCACAAGTTGAGAGTCATGGCGATGGGGCAACCTCAGATGTGGAGAAGGATGCAGAGCATGAAGGAAATGTGCATGTCCATACTCATGCATCACATGGTCACTCACATGGCCCTATTTCTTCGCATCCATCATCAGAACTTCTTCGTCATAGAGTTATATCACAGGTATTGGAGTTGGGAATTATTGTTCACTCAGTTATAATAGGAATTTCTGTGGGTGCTTCAGAGAGTCCTAAAACCATAAGACCCCTTGTAGCTGCGTTGACTTTTCATCAATTTTTTGAGGGCATGGGACTTGGAAGTTGCATAACTCAGGCAAATTTCAAGAGTCTATCAATCACAATCATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGGATTGGAATTGGTATAGGGATCAGTAGTGTTTATGATGAGAACAGTCCAACCGCTCTTATCGTTGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATCTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGCTTAGATTGGGATGCAATCTATCTCTTCTACTAGGAGCTCGTTGTATGTCACTTTTAGCCAAATGGGCTTAG 1083 0.4054 MGFKINIKEFILSILIFLIIPTLIAAECTCDEEDEDRDKSKALRYKIAALVSILVASAIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFIAMCTAMGTLMVDTYATAYFQNHYTKKAPAQVESHGDGATSDVEKDAEHEGNVHVHTHASHGHSHGPISSHPSSELLRHRVISQVLELGIIVHSVIIGISVGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITIMGLFFALTTPVGIGIGIGISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGARCMSLLAKWA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02407 360 PANTHER ZINC/IRON TRANSPORTER 42 355 - -
Trre5g02407 360 NCBIfam ZIP zinc/iron transport family 28 360 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre5g02407 360 Pfam ZIP Zinc transporter 45 357 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02407 Trre-Chr5 18580590 18583950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02407 11 360 Inorganic Solute Cotransporters AT3G12750 55.241 6.39e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02407 K14709 - gmx:547695 516.153