Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02406 ATGTTGATCCTTATTATATTCCCAACATTAATAGCTGCTGAATGCACGTGTGACAAGGAAGATGAAGATAGAAACAAAGCAAAAGCCCTAGTTTACAAAATAGTGGCTTTGGCGTCGATACTAATTGCGAGCGCAATTGGTGTTTTTATCCCACTTCTTGGTAAAATTATACCGGCATTGAGCCCTGAAAAAAATATATTCTTTATCATCAAAGCCTTTGCGGCCGGTGTGATATTATCAACCGGTTTCATTCATGTTCTACCAGATGCTTTTGAGAATCTTACTTCGCCTTGTTTAAACGAACATCCTTGGGGTGATTTTCCGTTTACGGGTTTTGTGGCTATGTGTACCGCTATGGGGACTCTTATGGTTGAAACTTATGCCACTGCTTATTTTCAGAATCAATATTCTAAAAAGGAGTCAACACACGTTGGGAGTCATAATGCGACCGCGGACGTGGAGAAGGAAGCTGGAGAGCATCATGGACATGTGGATGTTCATACTCATGCATCACATGGTCATGCACATGGCCGTGTTATTTCCGATCCATCGTTAGAACTTCTTCGTCATAGGGTCATATCAGAGGTGCTGGAGTTGGGAATTATTGTTCACTCTATTATAATTGGAATTTCTCTAGGTGCTTCAGACAGTCCAAAAACCATAAAGCCACTAGTAGCTGCATTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAAGCTATCAATTACACTAAGGGGATTATCCTTTGCTTTGACAACTCCAGTAGGAATTGGAATTGGTATAGCGATAAGTAGTGTTTATGACGAGAACAGTCCAACCGCGCTTATTGTTGAAGGAGTTTTCAATGCAGCTTCAGCTGGAATTTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAAAGTGGTAGGCTTAGATTAGGATGCAATCTATTTCTTCTACTAGGAGCTGGTTGTATGTCTCTTATAGCCAAATGGGCTTAG 1041 0.4015 MLILIIFPTLIAAECTCDKEDEDRNKAKALVYKIVALASILIASAIGVFIPLLGKIIPALSPEKNIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVETYATAYFQNQYSKKESTHVGSHNATADVEKEAGEHHGHVDVHTHASHGHAHGRVISDPSLELLRHRVISEVLELGIIVHSIIIGISLGASDSPKTIKPLVAALTFHQFFEGMGLGSCITQANFKKLSITLRGLSFALTTPVGIGIGIAISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLFLLLGAGCMSLIAKWA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02406 346 Pfam ZIP Zinc transporter 32 343 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre5g02406 346 NCBIfam ZIP zinc/iron transport family 16 346 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre5g02406 346 PANTHER ZINC/IRON TRANSPORTER 29 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02406 Trre-Chr5 18575941 18577150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02406 1 346 Inorganic Solute Cotransporters AT3G12750 55.014 8.36e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02406 K14709 - gmx:547695 514.998