Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02405 ATGGGGTTCAAAACAAGTATCAATCAATTTGTTTTTACTATGTTGATCCTTATTATATTCCCAACATTAATAGCTGCTGAATGCACGTGTGACAAGGAAGATGAAGATAGAAACAAAGCAAAAGCCCTAGTTTACAAAATAGTGGCTTTGGCGTCGATACTAATTGCGAGCGCAATTGGTGTTTTTATCCCACTTCTTGGTAAAATTATACCGGCATTGAGCCCTGAAAAAAATATATTCTTTATCATCAAAGCCTTTGCGGCCGGTGTGATATTATCAACCGGTTTCATTCATGTTCTACCAGATGCTTTTGAGAATCTTACTTCGCCTTGTTTAAACGAACATCCTTGGGGTGATTTTCCGTTTACGGGTTTTGTGGCTATGTGTACCGCTATGGGGACTCTTATGGTTGAAACTTATGCCACTGCTTATTTTCAGAATCAATATTCTAAAAAGGAGTCAACACACGTTGGGAGTCATAATGCGACCGCGGACGTGGAGAAGGAAGCTGGAGAGCATCATGGACATGTGGATGTTCATACTCATGCATCACATGGTCATGCACATGGCCGTGTTATTTCCGATCCATCGTTAGAACTTCTTCGTCATAGGGTCATATCAGAGGTGCTGGAGTTGGGAATTATTGTTCACTCTATTATAATTGGAATTTCTCTAGGTGCTTCAGACAGTCCAAAAACCATAAAGCCACTAGTAGCTGCATTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAAGCTATCAATTACACTAAGGGGATTATCCTTTGCTTTGACAACTCCAGTAGGAATTGGAATTGGTATAGCGATAAGTAGTGTTTATGACGAGAACAGTCCAACCGCGCTTATTGTTGAAGGAGTTTTCAATGCAGCTTCAGCTGGAATTTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAAAGTGGTAGGCTTAGATTAGGATGCAATCTATTTCTTCTACTAGGAGCTGGTTGTATGTCTCTTATAGCCAAATGGGCTTAG 1080 0.3972 MGFKTSINQFVFTMLILIIFPTLIAAECTCDKEDEDRNKAKALVYKIVALASILIASAIGVFIPLLGKIIPALSPEKNIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVETYATAYFQNQYSKKESTHVGSHNATADVEKEAGEHHGHVDVHTHASHGHAHGRVISDPSLELLRHRVISEVLELGIIVHSIIIGISLGASDSPKTIKPLVAALTFHQFFEGMGLGSCITQANFKKLSITLRGLSFALTTPVGIGIGIAISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLFLLLGAGCMSLIAKWA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02405 359 NCBIfam ZIP zinc/iron transport family 29 359 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre5g02405 359 Pfam ZIP Zinc transporter 45 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre5g02405 359 PANTHER ZINC/IRON TRANSPORTER 42 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02405 Trre-Chr5 18575941 18577189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02405 3 359 Inorganic Solute Cotransporters AT3G12750 53.611 8.15e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02405 K14709 - gmx:547695 517.694