Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02370 ATGGAGTTTCATGGCTTGGTTTTGCTATTTTGTTATGTTTGGTATCTCTTTTATGTGGGAAGTTGCAATGCTCAGTTACAGTCCTCTCAGACACAAGTTCTTCTCCAATTACAAAAACACTTAGAATATCCAACACAATTAGAAATATGGAAAGATCATAAATCAGAACTTTGCTTTATCTCTTCAACACAAGTCAAAATCACATGCAAGGACAATTTTGTTACTGAGCTAAGTATCTTTGGTGATAAGCCAAAAAATGGTAGAGATTTTGATGGTTTTGCTATTCCAAATCAAACACTATCACAAAGCTTCTCAATGGATTCATTTGTTGCCACTCTAGCAAGGCTTACTAGCTTGAAAGTTCTTCATCTTGTTTCCTTGGGAATTTGGGGACCACTTCCAAATAGCATTCATAGACTATTTTCACTTGAATATTTGGATTTGAGTTCAAATTTTCTTTATGGATCAATCCCTCCAAAAATCTCTACTATGGTCAACCTTAAAACTCTTATGTTAGGTGATAACTTCTTCAATGGTACCATTCCAAACTTGTTCAATTCATCAAATATTCTCACAGTTCTTAGTTTGAATAATAATAAGTTGAAGGGTCCATTTCCATTTTCAATCCTTAGTATCACAACCTTTACTATCATTGACATGTCAAGAAATCAAATATCAGGTAATTTGCAAGATTTTACTAGTTTGAGTATCTTGGAACAACTAGATTTAAGAGAAAATGAATTAGATTCCGATTTACCTGCTATGCCTAAAGAGTTGAAAGCGCTTTTCCTCAATCGGAACTCCTTCTCAGGTCAAATTCCACAACACTATGGTCAATTAAGTAAGCTTGAGCAGCTTGATATTTCCTTCAATAAACTCACAGGAACTACTCCATCTGCACTGTTTTCTTTGCCTAACATCAGTTACTTGAATTTAGGATCCAACAAGCTCAGTGGAACACTTCAAAATGACATAAAATGTGGCCATAGTCTTAGTTTTATTGATATATCAAACAATATGTTAGTTGGAGCCTTTCCTTCTTCTCTAAGCAATGTGTCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTTTGAAGCACCAGCATGCAGTATCTTATTGCACAGAAGCTCATGATAAGACGAAGTCGCACCGAGTTGGATTTTTTGTTGGTGTCATTGTTGGAATTCTTGTTATTCTTGTGCTTTTGGGTTTATGCATTGTTTTTACTTGTAAAAGGTATTACTCTAAGGGGATTTCAGAACAGCACCTATTGCATAAATCAGTTCAAGATAGCTTCTCAGCAGGATTCTCATCTGAGCTTATTGCAAACGCGAGGTATGTTTCTGAAGCTGCAAAGTTAGGCAGAGAAGATCTTCCGCCATGCCGATCATATTCATTTGAAGAGCTTAAGGAAGCAACAAATAACTTTGACAATTCAACTTTTCTTGGTGAAAATATATATGGGAAGCTGTATAGAGGAAAATTAGAGAGTGGTATACCTGTTGTAATAAGGTGCATACCTTTGTCGAAGAAGTACTCAATTCGGAATTTCAAATTAAGGCTGGATTTGCTTGCAAAGCTCCGTCATGCACATTTGGTATCCCTCTTGGGTCATTGCATTGATGGCATTTTAGGAGAGCGTATCGACTCAAAAGTCTTTCTCATTTATGAATATGTGTCAAATGGGAGTTTCCAAACTTATCTCTCAGGAGATAGTTCTGGAAAGATTTTCAATTGGCCAGAAAGATTGTCAGTTTTAATCAGTGTTGCTAAAGCTGTTCACTTCCTACACACTGGAATGATACCTGGTTTCTTCAAAAATAGACTTAAAACCAATAATATTTTGCTTAATGAAAATTGGATGGCAAAGTTGAGTGACTATGGATTATCCATTATCTCAGAAGAAACTGATGCAAGTGGGGTAAAAGGAGAAAATCCTAATTCATGGCAAATGAAAAAGCTAGAGGATGATATTTATAGCTTTGGATTCATACTACTTGAGGCACTAGTTGGACCTTCAACTTCTGCTAAAAAAGAAGCAACTGTGCTAAATGCAATGGCTTCCTTCAATAGTCAAGATGACTGGAAACAAATAGTGGAGCCAGTTGTGCAAGCTACTTGTTGCAAAGAATCTCTATCAATTGTGGTTTCTATAACTAACAAGTGCATTTCGACCGACTCGTGGAGTCGACCATCTATCGAGGAAGTCCTTTGGAACTTGCAGTATGCTTCTCAGGTCCAGACAACAGCTGATGGGGATCACAGAATTTGA 2286 0.3653 MEFHGLVLLFCYVWYLFYVGSCNAQLQSSQTQVLLQLQKHLEYPTQLEIWKDHKSELCFISSTQVKITCKDNFVTELSIFGDKPKNGRDFDGFAIPNQTLSQSFSMDSFVATLARLTSLKVLHLVSLGIWGPLPNSIHRLFSLEYLDLSSNFLYGSIPPKISTMVNLKTLMLGDNFFNGTIPNLFNSSNILTVLSLNNNKLKGPFPFSILSITTFTIIDMSRNQISGNLQDFTSLSILEQLDLRENELDSDLPAMPKELKALFLNRNSFSGQIPQHYGQLSKLEQLDISFNKLTGTTPSALFSLPNISYLNLGSNKLSGTLQNDIKCGHSLSFIDISNNMLVGAFPSSLSNVSENRVVKSDGNCLSGSLKHQHAVSYCTEAHDKTKSHRVGFFVGVIVGILVILVLLGLCIVFTCKRYYSKGISEQHLLHKSVQDSFSAGFSSELIANARYVSEAAKLGREDLPPCRSYSFEELKEATNNFDNSTFLGENIYGKLYRGKLESGIPVVIRCIPLSKKYSIRNFKLRLDLLAKLRHAHLVSLLGHCIDGILGERIDSKVFLIYEYVSNGSFQTYLSGDSSGKIFNWPERLSVLISVAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSIISEETDASGVKGENPNSWQMKKLEDDIYSFGFILLEALVGPSTSAKKEATVLNAMASFNSQDDWKQIVEPVVQATCCKESLSIVVSITNKCISTDSWSRPSIEEVLWNLQYASQVQTTADGDHRI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02370 761 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 564 761 - -
Trre5g02370 761 Gene3D Ribonuclease Inhibitor 259 386 IPR032675 -
Trre5g02370 761 Gene3D Transferase(Phosphotransferase) domain 1 564 759 - -
Trre5g02370 761 SUPERFAMILY Protein kinase-like (PK-like) 464 746 IPR011009 -
Trre5g02370 761 ProSiteProfiles Protein kinase domain profile. 481 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02370 761 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 100 745 - -
Trre5g02370 761 Gene3D Phosphorylase Kinase; domain 1 446 563 - -
Trre5g02370 761 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 257 - -
Trre5g02370 761 SUPERFAMILY L domain-like 112 374 - -
Trre5g02370 761 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Trre5g02370 761 Pfam Protein tyrosine and serine/threonine kinase 486 743 IPR001245 GO:0004672|GO:0006468
Trre5g02370 761 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 383 - -
Trre5g02370 761 Gene3D Ribonuclease Inhibitor 27 258 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02370 Trre-Chr5 18132978 18136544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02370 6 693 Miscellaneous Gene Families AT5G14210 51.783 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Trre5g02370 PK_Tyr_Ser-Thr 1.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02370 - - gmx:100802978 1149.81