Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02313 ATGACTACACAGAACAATGTAGTAACACCTGAAATTAAGTCATGTATTAATAATCTCATCTCTACCACGGTTTTACCAAGTGCAACAACTGTGCCAGAATCTATGGCTATGCTTGGTGGGTTTTTGAATTTTTCTCATAATAATAATAATAATTTAATTAAGAGATTGGAAGGTAGTAAAGTTAATGCTTGGATTGATTCAATGAGAGATTCTTCTCCTACTCGTACTATCAACAAATCCTCAGAAAATCAAGAAAAATGTTCTTGGATTCTTTATCATCCTTCAGCTTTGAAATTGTTTGATCAGATTTTGTATAGTGCAAAAGGAAAACAAATTGTGGTTTTTCTTGACTATGATGGTACTCTTTCTCCCATTGTTGCTGATCCAGATAAAGCTTTCATGACTAGAAAGATGAGAGGAACGCTTAAGGACATAGCAAGACATTTTCCAACAGCCATAGTGACAGGAAGGTGCAGAGACAAGGTGATTAACTTTGTAAAATTATCAGAACTGTACTATGCAGCAAGCCATGGTATGGACATTATGGGACCAACTAAAAATCAAACTGCTACTGAGAAAACTAACAAAGCAGTGTTGTTCCAACCTGCAAGTCAATTCCTACCAATGATTGATGAGGTGTACAAAATATTGTTAGAAAAAACAAAATCTGTCTCAGGAGCTAAGGTAGAGAACAACAAATTTTGTTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGCTCCATTGGCGGAGAAAGTTAGATTGGTGCTAAATGAATACCCAAAACTTAAGCTAACACAAGGAAGAAAAGTGTTGGAGATTCGTCCCACCATCAAATGGGACAAAGGAAAAGCTCTTGAATTCTTGTTGGAATCATTAGGATACGAGAATTCTAATGATGTATTCCCAATCTATATTGGTGATGATCGTACTGATGAGGATGCATTTAAGGTTTTGCGCAGAAGGGACCAAGGGGTTGGGATTCTTGTTTCTAGTGTTCCAAAAGAAACAGATGCTTCTTACACACTTCAAGATCCACCAGAGGTTGAGCATTTTTTGCGGCGATTAGTGGAGTGGAAAAGATCAAGTAGTAATGTGAACCCCACAAGTGCATAG 1122 0.3743 MTTQNNVVTPEIKSCINNLISTTVLPSATTVPESMAMLGGFLNFSHNNNNNLIKRLEGSKVNAWIDSMRDSSPTRTINKSSENQEKCSWILYHPSALKLFDQILYSAKGKQIVVFLDYDGTLSPIVADPDKAFMTRKMRGTLKDIARHFPTAIVTGRCRDKVINFVKLSELYYAASHGMDIMGPTKNQTATEKTNKAVLFQPASQFLPMIDEVYKILLEKTKSVSGAKVENNKFCLSVHFRCVDEKSWAPLAEKVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRRRDQGVGILVSSVPKETDASYTLQDPPEVEHFLRRLVEWKRSSSNVNPTSA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02313 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 48 369 IPR044651 GO:0004805|GO:0005992
Trre5g02313 373 SUPERFAMILY HAD-like 113 361 IPR036412 -
Trre5g02313 373 FunFam Trehalose 6-phosphate phosphatase 209 368 - -
Trre5g02313 373 CDD HAD_TPP 113 351 - -
Trre5g02313 373 Gene3D - 217 371 IPR023214 -
Trre5g02313 373 Gene3D - 112 210 IPR023214 -
Trre5g02313 373 NCBIfam HAD-IIB family hydrolase 114 322 IPR006379 -
Trre5g02313 373 Pfam Trehalose-phosphatase 115 348 IPR003337 GO:0003824|GO:0005992
Trre5g02313 373 NCBIfam trehalose-phosphatase 110 359 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02313 Trre-Chr5 17618416 17620986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02313 108 358 Trehalose Biosynthesis Gene Families AT1G70290 26.766 1.49e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02313 K01087 - gmx:100815979 563.918