Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02286 ATGGTGAGGCTGAGACTTGTTGTAGTTGTTATAGTAACAAAAACTTTATGGTTGTTGAACCACATCTTGGACACTTCAAACACTGGTTGTTTTATAGCAGATGAGATGATGATGAGGCTTTATGATGATGACGACGACGACGAGGCTTCAGTTCCGGTCATTGAGGGGCCAAGTCTACCGTCGACCGTAGTGACACACTTTGCTACTGTCAAGATTGCTAAACAGGCTTGGGACACTCTCTCAACCATGTACGCCAACAGATCGAGAGTTCAGGATCAAGTTGGTAGTTCTCCATTATACAGTGGTCTTCGTAGAAGAATCGGCCGGATTGTTAAACCGAGAAAACTTTCATCCCAGTTTCTTGGAAAGAAAGGTGACGATGGAGACGATGACCCGTTTATGGAAGAGGGTTTTCAAGATAAGGATAAGAAGAAGAAAATACATTTTATCCTTTGGATTCTTCGGCTTGTTTTGATCTTGATTATTGTTGTATTAGTAACAACTTTGACTGTTGCTTTTCTTAGGCGTAAAAATTTGTGGGAAATCAATTTATGGAAATGGGTGTTGTTGATTCTATTTGTAGCATGTGATGGGTTAATTTCTAACTAG 609 0.4023 MVRLRLVVVVIVTKTLWLLNHILDTSNTGCFIADEMMMRLYDDDDDDEASVPVIEGPSLPSTVVTHFATVKIAKQAWDTLSTMYANRSRVQDQVGSSPLYSGLRRRIGRIVKPRKLSSQFLGKKGDDGDDDPFMEEGFQDKDKKKKIHFILWILRLVLILIIVVLVTTLTVAFLRRKNLWEINLWKWVLLILFVACDGLISN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02286 202 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 75 201 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02286 Trre-Chr5 17308613 17309980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02286 87 202 Mechanosensitive Ion Channel Family AT1G78610 37.705 6.60e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02286 K22048 - tpra:123895810 93.5893