Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02245 ATGTCGTTTAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAACACATCAAACTTAAAACCAAAGGATGCTGCTCCATGGTCTGTTCTTCCCCTGACAAATCAGGATGGAAGAGTACTGGATCCGAGAAAGTCTCAAAATATTGCAACCTCGCTCAAGGCTCTTAATGTCACAATAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTAAGTGA 219 0.3927 MSFKLNEEMIETLFVVNTSNLKPKDAAPWSVLPLTNQDGRVLDPRKSQNIATSLKALNVTIEVCEALLEGSK 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02245 72 Gene3D Formin, FH2 domain 1 72 IPR042201 -
Trre5g02245 72 PANTHER FORMIN-RELATED 2 70 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02245 Trre-Chr5 16984955 16985776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02245 2 70 FH2 protein (formin) Gene Family AT3G25500 66.667 1.38e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02245 - - gmx:100801837 104.76