Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02243 ATGGATTTCAAAAAGCTTCTAAGAAAACCTAAACACGAACGCCGTGATGCTCTCAAGCTCTTCAATTACGACGCTCAATCGTCTTTCTCTTCGTTCGAATCATCTAGTTCAGTCTACACTTGTTCCACCGACTTAAACGATCGCACTAGCTTCCGAATTGATGGAATCGAAGGCGAGTTTGATTTTGATCGAATTTGTCAGAGTTTAGGACTTTCTGGACCTGAAGATTTTGCAATTCCTGCTGCTGCTTGGGAAGCTATGAAGTTTCGACCGTCTTCGGATATTCTTCCCAGTTTGAATAGGGATAGTATTAGGGTTACAGATGAGGTTGCTGAGACTGTTGTTGTTGTTGGTAGTGGTGGTGGTATCAATGGAATTCGTCCACCTATGATTAAACCGCCACCAGGGATGAGATTTCGGGTTCTTGATAACACGTGTTCAACTTGGGACCTTACGAAGGAATTGGGTCCTGCCGCGGAACCTAGGTCTAATAGTGCATCTCCTAATGGGAAAATTATGCCTATAATTACCCCTGGATTCTGGCAAAAGGGTGAGCGTGTGGGGCGAGGTTCGTTTGGATCTGTCTATGAAGGGATTTCTGAAGACGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGGTCAAATGGATCATGAAAAACAAAGTGTCTATCAACTGGAGCAGGAAATTGCACTTTTGAGTCAGTTGGAACATGAAAATATTGTTCGATACATTGGCACTGAAATGGATGAATCCGTGCTGTATATCTTTACTGAGTTTATGAACAAAGGTTCTCTTAGGAACCTCTATCGGCAGTATACTCTCCGAGATGCGCAAGCATCTGCCTATACAAGACAAACTGTGCATGGTTTGAAGTATCTTCACGATCAAAATGTAGTTCACAGGGACATCAAATGTGCAAATATATTGATAGACGCAAATGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGTAACCAACTTGATTGATGTTAAATCATGCGAGAGGACAGCGTTCTGGATGGCCCCTGAGGTTGTGAAACGAAAAGGCAAAGGTTATGGACTTCCAGCTGATGTTTGGAGTCTTGGATGCACTGTTTTGGAGATGCTAACAGGCGAAATTCCATACTCCAATTTAGAATATATTTCTGCACTATTTAGAATTGGAAAAGGTGAGCTACCTCCTATTCCTGATACTCTTTCAAGAGATGCAAAGGATTTTATCTTGCAGTGCCTTCAAGTTAATCCCGATGATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTCTCCAAAGGCGATTTTCCTAG 1320 0.4212 MDFKKLLRKPKHERRDALKLFNYDAQSSFSSFESSSSVYTCSTDLNDRTSFRIDGIEGEFDFDRICQSLGLSGPEDFAIPAAAWEAMKFRPSSDILPSLNRDSIRVTDEVAETVVVVGSGGGINGIRPPMIKPPPGMRFRVLDNTCSTWDLTKELGPAAEPRSNSASPNGKIMPIITPGFWQKGERVGRGSFGSVYEGISEDGFFFAVKQVSLLGQMDHEKQSVYQLEQEIALLSQLEHENIVRYIGTEMDESVLYIFTEFMNKGSLRNLYRQYTLRDAQASAYTRQTVHGLKYLHDQNVVHRDIKCANILIDANGSVKLADFGLAKVTNLIDVKSCERTAFWMAPEVVKRKGKGYGLPADVWSLGCTVLEMLTGEIPYSNLEYISALFRIGKGELPPIPDTLSRDAKDFILQCLQVNPDDRPTAAQLLNHPFLQRRFS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02243 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Trre5g02243 439 FunFam Mitogen-activated protein kinase 1, putative, expressed 179 439 - -
Trre5g02243 439 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Trre5g02243 439 SMART serkin_6 181 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02243 439 PRINTS Tyrosine kinase catalytic domain signature 259 272 IPR001245 GO:0004672|GO:0006468
Trre5g02243 439 PRINTS Tyrosine kinase catalytic domain signature 403 425 IPR001245 GO:0004672|GO:0006468
Trre5g02243 439 PRINTS Tyrosine kinase catalytic domain signature 339 349 IPR001245 GO:0004672|GO:0006468
Trre5g02243 439 PRINTS Tyrosine kinase catalytic domain signature 294 312 IPR001245 GO:0004672|GO:0006468
Trre5g02243 439 ProSiteProfiles Protein kinase domain profile. 181 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02243 439 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 122 436 - -
Trre5g02243 439 SUPERFAMILY Protein kinase-like (PK-like) 179 435 IPR011009 -
Trre5g02243 439 Gene3D Transferase(Phosphotransferase) domain 1 181 439 - -
Trre5g02243 439 Pfam Protein kinase domain 182 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02243 Trre-Chr5 16969971 16978673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02243 123 436 MAP Kinase Kinase Kinase AT4G08500 53.117 4.16e-127 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre5g02243 Pkinase 9.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02243 K13414 - mof:131161745 474.552