Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02235 ATGCCGGAGCAAACACAACGGAGGAAGGAAGGTAGTGATTCACAAGTGGAAGAGGGAGTATCTTTCAAATCCTTGTTGCTGAGAAGGAAGGAGGGAGGTGAGGTGGAGGAGAGTGGTGGGGTGAAGAAGAGTTTTCGTCTCAAGAGTATGGAGGACTTAGCTCCGTTAGAGCTGCAGACCTTTGCTGATAGGTTGAATATGGAGAAACATCATGAAGTGAAAGCAACACATATGGGGGGGAATATGGTCCTCATTCATAGCCCTTGTGATGGAGAGTTACCGGAGATGATGAGGTGTAACAAAGAATGGTGGGATCATTGTTTCTACAAGGTGATTCCATGGAAACCGAACCTGGTGTCAGAGAGTAGGGAAATATGGATTCAAATATTTGGGCTCCCTCTTCATGCTTGGGAGGAGAGTAGCTTTAAAATGGTGGCTGGTAGATTTGGAGTGTTTTTGGACTTTGATGAAGCTACTATTGAAAAGCAAAGGTTGGATGTTGCAAGGGTGAAGCTCCGGACTGTTAGGAGATGCTTAATAGATACGGTAATCCAACTTTCAGTGCTTGGGTCCAAGTTTGATGTGTGGGTGGTGGAGGAAAGGTGTAACTGCTCTAGTGAAGTGAAAGAGGAGGCTACTATTGGTTCAGGAAGGACGTTGAGCAACTCCGACGAGGAGGTGTGGCATGGGGACGATGGTGATTTGTTCTTTGATGGGAAGACGGATAGCGACAGGTCGGACTCTTACCAACAACTCCTTGACCTGGAAAAGAATGGCAGGAAAAAGTCTATTGAAGTGACAGAGTTAGCGGCGGTGATAGCTACAACTAAGGGGGAGAGGGTTACTGTTTGCCACACGCAACCTTTGGTGGAGGTGATAGTTAGGGAAGGAATGTCAGACAGTCAGTCCCTTGGGGGACAAGTAGAAGCTCAAAAGGATGATTGTACACAGGTATCAAGTAATGTGGACAAAAGGGAGACATTGGAGGTACGAGGTTTTGTGTGTGGAGTGGGTCCTGATCCTGTCCCTTGTGAAAAAGGTGGTGGTGATGTGTCTGTTGGGGGAGAGAGAAGAGTGGATAATCCTTTTGTGATGGAGGGTAATGACCAGGTGGTGTTGTGTGGGGACAACAGATGGAATCCGTTTGTGGATCCCGTGGATGAAGGGGAGAGAAATATGGGCCGACCCATGTGTGAAGAGGCCCAACATGATTATCATGTTCCTACAGCATGTGAGGAGGAAGGGGTGGGTGTAACAAAGTGTGGTGGGGTCTATGGTGTTGTTGTTTCTAATGCACGTGAGGAAGAGGGTGTGGAATTAAGGAAGAATGGTGGGGCCCATGGTGTTGTGGTTTACTCTGATGTTTCTGGGTCCTCTCAAAGCACTTCAACGGGTGATTGTTTTCAATTTCAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACTGCCCGGGTTCAAAAAGTCAGAGATGAGCTTGAACAGTTGCTGGATGACGATGATGACATGGCCGACCTATATTTGTCGAGAAAGGCAGGTTCAGCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGTTCGCTGGCTCCCCAACCATAGGATCAAAGATATCCAGAGCAAGCATTGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTGCTTGAGCTACTAGAATATATTGACAATACTGAAGATTACATTAACATTCAAGTAAGTGTAGTCATAGTACCAGGAATGTATATCACGGAGCATGTGGATTAG 1800 0.4633 MPEQTQRRKEGSDSQVEEGVSFKSLLLRRKEGGEVEESGGVKKSFRLKSMEDLAPLELQTFADRLNMEKHHEVKATHMGGNMVLIHSPCDGELPEMMRCNKEWWDHCFYKVIPWKPNLVSESREIWIQIFGLPLHAWEESSFKMVAGRFGVFLDFDEATIEKQRLDVARVKLRTVRRCLIDTVIQLSVLGSKFDVWVVEERCNCSSEVKEEATIGSGRTLSNSDEEVWHGDDGDLFFDGKTDSDRSDSYQQLLDLEKNGRKKSIEVTELAAVIATTKGERVTVCHTQPLVEVIVREGMSDSQSLGGQVEAQKDDCTQVSSNVDKRETLEVRGFVCGVGPDPVPCEKGGGDVSVGGERRVDNPFVMEGNDQVVLCGDNRWNPFVDPVDEGERNMGRPMCEEAQHDYHVPTACEEEGVGVTKCGGVYGVVVSNAREEEGVELRKNGGAHGVVVYSDVSGSSQSTSTGDCFQFQISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGAANWFAGSPTIGSKISRASIATVRLDENDVEELEMLLELLEYIDNTEDYINIQVSVVIVPGMYITEHVD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02235 599 MobiDBLite consensus disorder prediction 1 21 - -
Trre5g02235 599 Gene3D Magnesium transport protein CorA, transmembrane region 456 586 - -
Trre5g02235 599 PANTHER DUF4283 DOMAIN PROTEIN 14 231 - -
Trre5g02235 599 Pfam Domain of unknown function (DUF4283) 68 171 IPR025558 -
Trre5g02235 599 Coils Coil 480 507 - -
Trre5g02235 599 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02235 Trre-Chr5 16904922 16913727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02235 466 584 MRS2 Gene Family AT5G09690 65.468 1.57e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02235 K16075 - gmx:100786817 150.214