Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02223 ATGCCTACCATCACCAATCATATAATAACCCAAAAAGAAAACCAAAGGCCACAGAAAACTGAGAAACAACCATCATGGTCAGTGGTAAGAGGCTTTTTAGCTTGTAGAAATGTTGAAATCCAACAACAACAGCAGAAGGAAGCAAAGCAACAGCCACAACCTCAACCTGTACCAGAAGCAAAACAACCAAAGAAAAAACAGGAACAGAGGAAGCTGAAAGAAGAAAGAGGCTCAGAAGATAACAACAAAAAAAGCAAGAAGATGAAATGTTCAGGTTCTCTTTGCAACAACACTGGAATGATGGCAAAGCCAGAAACAACAATAACAACAGCAGCAGCTGCAGCAACAAGAACAACTACTGATATTCACAAGAAAAAGGTGTCACTTGGTGGATGCAAAAACAACTTGGCTTCTAGTTCTAGTAGATCCATGAAAGCTCCTCTGAATGAACTCAATGGAAGAACTGTGTCAGCCTTGTCTTCTTCTTCGCTTTCAGCAGCATCTTCTAACTCTTCAGGCGCTGGTTCTTTTAAGGGAATGCCATTTAGGAGACTATCCGGTTGTTACGAGTGTCGAATGGTGGTTGACCCTGTTCTTGGTTTCACCAGAGACTCTTCTCTAAGAAGCTCCATTTGTTCTTGTCCTGATTGTGGTGAGATCATGAAATCTGAAAATCTTGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATAATATTTCATTCAAGCTGGCTAAAGAAGCAATCTCCGGTCTGCAAAATCGATCGCATCCTAAAAGTCCACAACACCCAGAAAACCATCTCCAAATTCGAAGAGTACAGAGACTCAATCAAAGCAAAAGCCACAAATCTATCAAAAAAACACCCCCGCTGCATAGCAGACGGAAACGAGCTACTAAGGTTTCATTGCACCACTTTTGTTTGTTCTTTAGGACTAAACGGTTCCTCAAACCTCTGCAACACAACCTCACAATGCAATGTGTGTAGCATAATAAAACACGGGTTCAAATTGAGTGGCGGAAATGGGATACTAACGACCGCAACGAGTGGGAAAGCACACGACAAAGCTAGTAGTATTTTGGAGGTTTCAGGTTGTGAGAGTGATGAGAGGAGGGCAATGTTGGTTTGTAGGGTGATAGCAGGAAGAGTGAAGAAGAACATGGAAGGTAGTAGTAATGGTGTGGAAGAGTGTGATTCGGTTAGTGCTGGTGATGCTGGGGCTTATTCTAATTTGGATGAGTTATATGTGTACAATCCAAGAGCTATTTTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1341 0.4169 MPTITNHIITQKENQRPQKTEKQPSWSVVRGFLACRNVEIQQQQQKEAKQQPQPQPVPEAKQPKKKQEQRKLKEERGSEDNNKKSKKMKCSGSLCNNTGMMAKPETTITTAAAAATRTTTDIHKKKVSLGGCKNNLASSSSRSMKAPLNELNGRTVSALSSSSLSAASSNSSGAGSFKGMPFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIMKSENLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNTTSQCNVCSIIKHGFKLSGGNGILTTATSGKAHDKASSILEVSGCESDERRAMLVCRVIAGRVKKNMEGSSNGVEECDSVSAGDAGAYSNLDELYVYNPRAILPCFVVIYRGF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02223 446 Gene3D - 235 444 - -
Trre5g02223 446 MobiDBLite consensus disorder prediction 61 87 - -
Trre5g02223 446 MobiDBLite consensus disorder prediction 1 26 - -
Trre5g02223 446 SUPERFAMILY ADP-ribosylation 236 445 - -
Trre5g02223 446 MobiDBLite consensus disorder prediction 40 96 - -
Trre5g02223 446 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 88 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02223 Trre-Chr5 16732084 16733873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02223 199 442 C2H2 Transcription Factor Family AT5G54630 48.649 9.51e-71 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02223 5 16732084 16733873 Trre5g02223 5 16732084 16733873 ECH