Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02222 ATGAGCAAATCCAAAACTCAAAGAATGCCTACCATCACCAATCATATAATAACCCAAAAAGAAAACCAAAGGCCACAGAAAACTGAGAAACAACCATCATGGTCAGTGGTAAGAGGCTTTTTAGCTTGTAGAAATGTTGAAATCCAACAACAACAGCAGAAGGAAGCAAAGCAACAGCCACAACCTCAACCTGTACCAGAAGCAAAACAACCAAAGAAAAAACAGGAACAGAGGAAGCTGAAAGAAGAAAGAGGCTCAGAAGATAACAACAAAAAAAGCAAGAAGATGAAATGTTCAGGTTCTCTTTGCAACAACACTGGAATGATGGCAAAGCCAGAAACAACAATAACAACAGCAGCAGCTGCAGCAACAAGAACAACTACTGATATTCACAAGAAAAAGGTGTCACTTGGTGGATGCAAAAACAACTTGGCTTCTAGTTCTAGTAGATCCATGAAAGCTCCTCTGAATGAACTCAATGGAAGAACTGTGTCAGCCTTGTCTTCTTCTTCGCTTTCAGCAGCATCTTCTAACTCTTCAGGCGCTGGTTCTTTTAAGGGAATGCCATTTAGGAGACTATCCGGTTGTTACGAGTGTCGAATGGTGGTTGACCCTGTTCTTGGTTTCACCAGAGACTCTTCTCTAAGAAGCTCCATTTGTTCTTGTCCTGATTGTGGTGAGATCATGAAATCTGAAAATCTTGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATAATATTTCATTCAAGCTGGCTAAAGAAGCAATCTCCGGTCTGCAAAATCGATCGCATCCTAAAAGTCCACAACACCCAGAAAACCATCTCCAAATTCGAAGAGTACAGAGACTCAATCAAAGCAAAAGCCACAAATCTATCAAAAAAACACCCCCGCTGCATAGCAGACGGAAACGAGCTACTAAGGTTTCATTGCACCACTTTTGTTTGTTCTTTAGGACTAAACGGTTCCTCAAACCTCTGCAACACAACCTCACAATGCAATGTGTGTAGCATAATAAAACACGGGTTCAAATTGAGTGGCGGAAATGGGATACTAACGACCGCAACGAGTGGGAAAGCACACGACAAAGCTAGTAGTATTTTGGAGGTTTCAGGTTGTGAGAGTGATGAGAGGAGGGCAATGTTGGTTTGTAGGGTGATAGCAGGAAGAGTGAAGAAGAACATGGAAGGTAGTAGTAATGGTGTGGAAGAGTGTGATTCGGTTAGTGCTGGTGATGCTGGGGCTTATTCTAATTTGGATGAGTTATATGTGTACAATCCAAGAGCTATTTTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1365 0.4154 MSKSKTQRMPTITNHIITQKENQRPQKTEKQPSWSVVRGFLACRNVEIQQQQQKEAKQQPQPQPVPEAKQPKKKQEQRKLKEERGSEDNNKKSKKMKCSGSLCNNTGMMAKPETTITTAAAAATRTTTDIHKKKVSLGGCKNNLASSSSRSMKAPLNELNGRTVSALSSSSLSAASSNSSGAGSFKGMPFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIMKSENLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNTTSQCNVCSIIKHGFKLSGGNGILTTATSGKAHDKASSILEVSGCESDERRAMLVCRVIAGRVKKNMEGSSNGVEECDSVSAGDAGAYSNLDELYVYNPRAILPCFVVIYRGF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02222 454 MobiDBLite consensus disorder prediction 1 21 - -
Trre5g02222 454 Gene3D - 243 452 - -
Trre5g02222 454 MobiDBLite consensus disorder prediction 48 104 - -
Trre5g02222 454 MobiDBLite consensus disorder prediction 69 95 - -
Trre5g02222 454 SUPERFAMILY ADP-ribosylation 244 453 - -
Trre5g02222 454 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 96 451 - -
Trre5g02222 454 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02222 Trre-Chr5 16732084 16733897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02222 207 450 C2H2 Transcription Factor Family AT5G54630 48.649 9.83e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02222 - - psat:127084116 725.702