Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02193 ATGGTGAATGCCTTTAGGGAGAGAAGAACACTTGCTTTGGCATTGGGTAACACCAAAGGAGTAGTGAAAAAAGTTAACCGAATGCTTAATCTTTTGGCTGGCAATATCATGTTTATTATCTGGCTCATCATATTGGAGATTGTCACCCTCAAGATTCTTATTTATATGATTTCACAAGTTTCTTTATTTGGATTTATATTTGGAAACACTCTGAAGACAATATTTGAGCCAATAATATTCTTATTTTTCATGCACCCATATGATGCAGGAGATAGATGTCAAATTGACGAGATTGAGGTAATGTTTATATCTTTAGGAGTTTATGAAATATCATGGTGA 339 0.3363 MVNAFRERRTLALALGNTKGVVKKVNRMLNLLAGNIMFIIWLIILEIVTLKILIYMISQVSLFGFIFGNTLKTIFEPIIFLFFMHPYDAGDRCQIDEIEVMFISLGVYEISW 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02193 112 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 101 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02193 Trre-Chr5 16509643 16510078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02193 1 101 Mechanosensitive Ion Channel Family AT2G17000 55.446 4.57e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02193 K22048 - cpap:110819000 126.716