Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02186 ATGAGTAAGGCAAGGCCTTATGTCTTAACGGTGGGATTGCAATTTGGGTTTGCAGGAGCATACATATTCTCAATGGCTAGTTTTAACCTTGGAATGAATCGTTTTGTGTTCATTGTTTATCGTAATGTTATTGCTGCAATTGCTCTTGCTCCTTTTGCATTCATCTTTGAAAGGAAAATTAGGCCAAAGATGACAATCTCAGTCTTTTTGCGGATAATGGCGCTCGCTTTTTTGGAGCCAGTGATTGATCAAGGATTCACTTTCTTGGGAATGCAATATACATCAGCTTCATTTGCATCTGCTTTGATGAATGCTGTGCCTTCTGTTACCTTTGTGTTAGCCGTAATTTTCAGGATAGAGCGTGTAAATTTGAAGCAGATACGAAGCATAGCGAAGGTGATAGGGACATTAGTAACATTTGCGGGGGCTTTAATGATGATACTTTATAAAGGACCACCAATCCATCTTTTTTATTCTCCAAACACGGCCCATCAAGCTAGTCACAACACGCAAAATCTCAAACATTGGGTTTCAGGAACACTCTTTCTATTATTGGGTTGTGTGGCTTGGTCATCTTTCTTCATTTTACAGTCGATAACGTTGAAAAAGTATCCAGCTGAAATGTCATTGTCAACCTTAATATGTTTAGTTGGTGCTTTGATGAGTGGTGTGGTGGCAATGGTAGCGGAGCGTCACTCTGGTGCTGAGGTTTGGGCTGTTGGCTGGGACTTTAGACTATATGGTCCTCTCTATACGGGAATAATCACCTCAGGAATAACATATTATGTGCAAGGGTTGGTATTGCAAAGCAGAGGCCCAGTATTTTATACAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTGGGCTCCTTCCTTTTCGCCGAGCAAATCCACTTGGGCAGTATCATCGGAGCCTTGATTATTGCTATCGGTCTTTATTCTGTGGTGTGGGGTAAAGCAAAAGACTATTCAGCCACTACTACGCCAGAATCATCAGTTACAATGAAGCAAATTGAGGGACAACAACTTCCGATTACTTCATCTGATCATGTTTAA 1062 0.4096 MSKARPYVLTVGLQFGFAGAYIFSMASFNLGMNRFVFIVYRNVIAAIALAPFAFIFERKIRPKMTISVFLRIMALAFLEPVIDQGFTFLGMQYTSASFASALMNAVPSVTFVLAVIFRIERVNLKQIRSIAKVIGTLVTFAGALMMILYKGPPIHLFYSPNTAHQASHNTQNLKHWVSGTLFLLLGCVAWSSFFILQSITLKKYPAEMSLSTLICLVGALMSGVVAMVAERHSGAEVWAVGWDFRLYGPLYTGIITSGITYYVQGLVLQSRGPVFYTAFNPLCMIITCALGSFLFAEQIHLGSIIGALIIAIGLYSVVWGKAKDYSATTTPESSVTMKQIEGQQLPITSSDHV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02186 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 322 - -
Trre5g02186 353 Pfam EamA-like transporter family 16 147 IPR000620 GO:0016020
Trre5g02186 353 Pfam EamA-like transporter family 178 318 IPR000620 GO:0016020
Trre5g02186 353 PANTHER WAT1-RELATED PROTEIN 6 325 IPR030184 GO:0016020|GO:0022857
Trre5g02186 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02186 Trre-Chr5 16444725 16455346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02186 1 351 Nodulin-like Gene Family AT4G08300 50.423 8.89e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02186 - - gmx:100812537 544.658