Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02184 ATGGGTGCTTGGTTAAGAAATGCAAAGCCATATCTACTACTCTTGGCTGTTCAATTTGGTTCTGCAGGTATGTTCATTTTTGCCATGGATGCTATCAAGAAAGGTATGAGCCATTACGTCTTCATCGTCTACCGGAATGCCATCGCTGCTGTAACTCTAGCGCCTTTCGCATTTCATCTTGAAAGGAAAATTAGGCCAAAGATGAGTCTACGTGTATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTTGATCAATGTTTTGCTCTGTTGGGGATGAAATTAACGTCTGCGTCGTTCCTGTCTGCGGTGATGAATTCTGCGCCATCCATTACTTTTGTTTTGGCAGTCATTCTAAAATTGGAGCACATGAAGATTAAGGAGGTAGCATGTCAAGCGAAAATAATTGGCACTATAGTAACGTTTGGTGGAACATTGCTAATGGCACTATACAAAGGTCCTGTTGTTAGTGTTGTGAGGTCATCAATTGGTCATGTTACTCGCCAGCCAGTGAGTGACTCCACTGGTGGTAACGACCGGTGGATCATAGGGACATGTTTCCTCCTCATTGGTTGCGCCGGCTTTTCTGCCTTTTACATATTGCAGGCCATAACGTTGAGAAAGTATCCGGCACCAATGTCTTTGGCTACTTGGGTTTGTTTTATTGGCGCAATTCAAAGCTTTGTGGTTGCATTTTTCGCTGAGCGACATAACTCTCATGCTTGGTCTCTTGGTTGGGATACACGACTCTTTGCACCCGCTTATGCGGGCATAGTTACATCAGGAGTCCAATATTACATACAAGGTATGGTCATCAAAAGTATGGGTCCTGTTATTGTAACCGCTTTCAATCCCGTCCGTATGATCATCGTAACTGCCTTGGCGTGCATCATCCTCTCCGAGCAACTCTTTCTTGGAAGCATTATTGGAGCAATTGTGGTGGTTCTTGGGCTTTATCTAGTTGTGTGGGGAAAATCCAAAGAATACAAAGCTAGGAATGATATGCAAACTTCACCTACAAAGGATAACACATTGCATGACCAACAACAGCTACCAGTGACAGCTCCTACAAATGAAAATAGTGATAATAAAGCTAAATTGGTCATTCATCATGGTAAAGAAAATTGTCAAGGTTGTGACCAAAATTAA 1155 0.4242 MGAWLRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIAAVTLAPFAFHLERKIRPKMSLRVFSEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFVLAVILKLEHMKIKEVACQAKIIGTIVTFGGTLLMALYKGPVVSVVRSSIGHVTRQPVSDSTGGNDRWIIGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFIGAIQSFVVAFFAERHNSHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPVRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKSKEYKARNDMQTSPTKDNTLHDQQQLPVTAPTNENSDNKAKLVIHHGKENCQGCDQN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02184 384 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Trre5g02184 384 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Trre5g02184 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Trre5g02184 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 329 - -
Trre5g02184 384 PANTHER WAT1-RELATED PROTEIN 10 337 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02184 Trre-Chr5 16422142 16424302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02184 5 379 Nodulin-like Gene Family AT2G37460 41.910 2.04e-107 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02184 - - psat:127084085 616.305