Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02179 ATGGCACCAAAGAAAAGCATTATCGGCGAAGAAGAGAATCAAAGAAGAGTCTTCAATGAAGAATACAAACTTATTATTTTGAAAGCGATTCCCGAGTTCATGTCCAAAACCGGAATGACTCCTTATTCAGCTGATTTTCACACTTTTGTGAAAAATAAGATCCGTGGTAAAATAACTGTCGCACAATTGAAAAGGAAGATTCACGGTTTTAAGGGAAAATATGGAAAAGAAGCTGAGACATTCACTAAAACTCATGATAAGAAGACTCAAGACTTAGTGAATGTCTCACCTTCTTTTCATGAGTTTTAG 309 0.356 MAPKKSIIGEEENQRRVFNEEYKLIILKAIPEFMSKTGMTPYSADFHTFVKNKIRGKITVAQLKRKIHGFKGKYGKEAETFTKTHDKKTQDLVNVSPSFHEF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02179 102 Pfam Protein of unknown function, DUF573 15 91 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02179 Trre-Chr5 16379096 16379404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02179 15 92 GeBP Transcription Factor Family AT1G61730 30.952 3.14e-08 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre5g02179 DUF573 4.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02179 - K06286 cam:101512869 62.003