Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02164 ATGGTTCTCCGGTTTCGCCGCGAAATTCGATCACTTGATGATTGTATAAGATTGTGTTCAGAACAAATAGACCAATTTAATCAACAAAAACAAGATTTGGCTTTTCTCAGAGGCTATGTTGATGCCTTCAAAGAGCAAATTCACACAGATATATTGATAAGTCCAGGCAATCATGGTCCACCTATACCTGCACATAAATCTGTTTTGGCTGCAAGATCAGAAATTTTTAAGAACATGCTAGAGTATGATGAATGTAAAGCTGCACCAACTTGTAACACAATAACAATACCTGATTTGAACCATGAAGAACTAGAATCACTTCTAGAGTTTCTCTATAGTGGGACATTACCATTGGAAAAATTGGAGAAACATGTATATGCTTTGTCACAAGCAGCTGATAAGTATATTATTCCACACTTGTTGAAATATTGTGAAAGATACTTATACAACTCACTTAGCACTTCTAATGCATTTGAGACATTAGAAATTGCTGACACTTGTTCAAACAACAATTTGAAGGAGACAACTTTTAATTTCTTAGTGAAAAATATTGAGCATATGGTTTCTTCTCCTAAATTTGAAGCTTTTGTGCATAGGAGTCCACATTTAACAGTGCAATTAGTTACAAGAGCATTTGTGAATGGTTCAAAATTAGTATTGTGA 663 0.3424 MVLRFRREIRSLDDCIRLCSEQIDQFNQQKQDLAFLRGYVDAFKEQIHTDILISPGNHGPPIPAHKSVLAARSEIFKNMLEYDECKAAPTCNTITIPDLNHEELESLLEFLYSGTLPLEKLEKHVYALSQAADKYIIPHLLKYCERYLYNSLSTSNAFETLEIADTCSNNNLKETTFNFLVKNIEHMVSSPKFEAFVHRSPHLTVQLVTRAFVNGSKLVL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02164 220 SUPERFAMILY POZ domain 34 150 IPR011333 -
Trre5g02164 220 Pfam BTB/POZ domain 43 151 IPR000210 GO:0005515
Trre5g02164 220 ProSiteProfiles BTB domain profile. 49 120 IPR000210 GO:0005515
Trre5g02164 220 Gene3D Potassium Channel Kv1.1; Chain A 17 151 IPR011333 -
Trre5g02164 220 Gene3D - 152 217 - -
Trre5g02164 220 SMART BTB_4 49 152 IPR000210 GO:0005515
Trre5g02164 220 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 217 IPR044784 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02164 Trre-Chr5 16234255 16235689 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trre5g02164 BTB 1e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02164 K10523 - gmx:100777561 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02164 5 16234255 16235689 Trre5g02164 5 16234255 16235689 ECH