Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02159 ATGTCACCGACCGCCGCAATCCACGTCCCTCTTTTACCTGGATCAAAATCAATGGCGGAGCATGGTACAATTCCCGGCGCCGTATTCAATGTAGCTACAAGCATAATTGGATCTGGAATAATGTCAATTCCAGCAATTCTAAAAGTTCTCGGCGTGTTTCCTTCATTCGCATTGATTTTAATCGTGGCGGTGCTTGCAGAAATTTCCGTAGATTTTCTGATGCGTTTTACAGATGCCGGTGCAAAAACGACGTATGCCGGTGTCATGAAGGAGGCTTTTGGACCGGTTGGAGCATTGACCACTAAAGTTTTTGTTATAATTAACAACTTTGGGGGATTAATTCTCTTACTTATTATTACAGGTATTTTTTTTGACTAA 378 0.418 MSPTAAIHVPLLPGSKSMAEHGTIPGAVFNVATSIIGSGIMSIPAILKVLGVFPSFALILIVAVLAEISVDFLMRFTDAGAKTTYAGVMKEAFGPVGALTTKVFVIINNFGGLILLLIITGIFFD 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02159 125 Pfam Transmembrane amino acid transporter protein 22 122 IPR013057 -
Trre5g02159 125 PANTHER AMINO ACID TRANSPORTER 19 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02159 Trre-Chr5 16215953 16216330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02159 1 121 Amino Acid or Auxin Permease AAAP Family AT3G56200 50.000 3.47e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02159 - - lja:Lj6g3v0466600.1 152.91