Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02149 ATGATTACCGTAGTCATACAGTTTTTCGATGCTTGTCTCAAACCATTAGGACAAACCTCCCTTGTATCACAGATTCTTGGAGGATTGGTATTTGGTCCATCAGTTTTGGGGCACAAAAAGATGCTGACAAGTATTTTATTCCCTATGAAAGGTTCTGTAATACTTAAAACAATGGCAACTTTCTGCCTAAATTTCTTCTACTTCATATGTTGTGTAAAGATGGATACAGTTACAATGCTGAAAACAGAAAAACAAGCCATCACAATTGGTATTTCTGTATTTGCATTAACATTAGGAGTCCCTCTTGGAATAGCCTTTACAATGATCAAATACGTAGCCATGGACAAAACCCTCGCGGACGCTCTCCCAATAATAGCTGTCTCGCAAAGCTTAACCGTATTCATCAGCATATCAGTCCTTCTAGCAGAGCTTAAAATCCTTAACACGGACGTCGGACGTCTAACCTTATCATCAGCAATGTTTGCTGATGTTGTTAGCTTTTCTATGTCGGTAGTTATGTTTGCAGCATTGCAGACGAAAGCTGGTAATAGCAGTATGATAACAATACTATGGATCATTATATCCAATATTGCACTCTTTGTTATTATCATATATGTAATGCGGCCAGCTATACTATGGTGTGCAGCCCGATTACATGGAAAGCCTATCGATGAACTTTGCATCCTTTGTATCATTCTATGTGTTCTCCTAACTGCACTTATTAGTGAGGTCATTGGACAGCATTTTGCTATGGGACCAATTCTTTTAGGCTTGGTTGTTCCTGAAGGGCCGCCTTTAGGAACAAGTTTGATAACGAAAATGGAGACGATTACTTGTGGTTTTTTGTATCCAATCTACCTTGCTGTCAGTGGATTGCAGACTGATGTCTTCAAAATCAACATGAAGTCTGTCTGGATTGTTACTGTCATAGTTATAGCGGGTTTCGTGGTGAAGATCGGTGGTGTTATGTTGCCAGGTTATTATTATAATGTTCCCATGAAAGAATGTTTTATGATTGGGCTCCTTCTTAATGGAAGAGGTATAGCTGAGCTTACCATGTACAATATATGGAAGGAAGGCAAGATATTAACAGAACAAGAGTTTGCTTTGATGGTGGTGTCTCTTCTAGTGATAAATGCTATCATAGCACCAGTGATAAACTTTCTATTTGATCCTTCAGCGCCATACCATTCAGGAAAGAGATGTACAATACAACATACAAAGCGAGACTCCGAGCTTCGAATCATGGCATGCGTTTACAAAGATGAAAACATCCCAACAATGCTCAATGTCATAGAAGCGTCATGTGCAAGCAAAGAAAGCAATGTTGCAGTTATAGCACTTCTCCTTGTAGAGATTCTGGGGAGATCAAGGCCTATTCTCGTTGCACACCAGCCCCACGACACACTTCGGACGACCAAATGCCATTCACCTCGGCTCGACAATGCATTGAAACAATATGAACAGCTAAATGAAGGGTGTGCATATATTCAATCATTCACCTCAATCTCCGACTTCGACACAATCCACGACGACGTTTGTCGAATAGCGCTCGACAGAAGAGCCAACATTTTGATAATGCCATTTCACAAAAGATGGGAGATAGATGGATCAGTTGAGGTAAACAATAGAGCAGTACAAGCAATCAACATCAAAGTCCTCGATAAAGCGCCTTGTTCAGTCGGAATCCTCATAGACCGAGGCATCTTAAGCAGTTCTCCGTCGCTTTTAATAGCTAAATCAACATACTATGTTGCTGTCCTCTTCATAGGAGGTGCAGATGATGCCGAAGCACTAGCCTATGGTAGTAGAATGGCTAGACATGAATGTGTGAGTGTATCGGTGGTTAGATTCCTTGTTTTCGGAGAAGAGAATTCAAAAGATAGAAAACGTGACAGCGATCTTGTCGATGAATATAGATACTATAACGTCGGAAATATAAGGTTTGAGATAACAGAAGAAGTTGTGAAAGATGGAATAGAATTTTCTTCAAGTATAAGAAGAATGATAGATTATTTTGATTTAGTTATTGTTGGAAGGGAACATACACAATCAGTTTTGTTAAGAGGACATGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGATTGGTGATATGTTGGCTTCACAAGATTTTGTGACAAAGGCATCTGTGTTGGTTGTGCAACAACAAAGAATGGGAGGGAGATTGGTTAAACATAATATATTGACAAATCAAAGGGATCAACTTGGACATGATGTTTCAATGGATGAACCACCAAGAGCTTCTTGTAGTATTTCTGTGGATAAATATCAAATGTAG 2301 0.3959 MITVVIQFFDACLKPLGQTSLVSQILGGLVFGPSVLGHKKMLTSILFPMKGSVILKTMATFCLNFFYFICCVKMDTVTMLKTEKQAITIGISVFALTLGVPLGIAFTMIKYVAMDKTLADALPIIAVSQSLTVFISISVLLAELKILNTDVGRLTLSSAMFADVVSFSMSVVMFAALQTKAGNSSMITILWIIISNIALFVIIIYVMRPAILWCAARLHGKPIDELCILCIILCVLLTALISEVIGQHFAMGPILLGLVVPEGPPLGTSLITKMETITCGFLYPIYLAVSGLQTDVFKINMKSVWIVTVIVIAGFVVKIGGVMLPGYYYNVPMKECFMIGLLLNGRGIAELTMYNIWKEGKILTEQEFALMVVSLLVINAIIAPVINFLFDPSAPYHSGKRCTIQHTKRDSELRIMACVYKDENIPTMLNVIEASCASKESNVAVIALLLVEILGRSRPILVAHQPHDTLRTTKCHSPRLDNALKQYEQLNEGCAYIQSFTSISDFDTIHDDVCRIALDRRANILIMPFHKRWEIDGSVEVNNRAVQAINIKVLDKAPCSVGILIDRGILSSSPSLLIAKSTYYVAVLFIGGADDAEALAYGSRMARHECVSVSVVRFLVFGEENSKDRKRDSDLVDEYRYYNVGNIRFEITEEVVKDGIEFSSSIRRMIDYFDLVIVGREHTQSVLLRGHDQWSECPELGVIGDMLASQDFVTKASVLVVQQQRMGGRLVKHNILTNQRDQLGHDVSMDEPPRASCSISVDKYQM 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02149 766 Gene3D - 1 394 IPR038770 -
Trre5g02149 766 PANTHER CATION/H + ANTIPORTER 2 725 - -
Trre5g02149 766 Pfam Sodium/hydrogen exchanger family 12 384 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02149 Trre-Chr5 16128511 16131633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02149 13 723 Antiporter Super Family AT2G13620 36.388 1.83e-159 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02149 K26731 - gmx:100779700 998.038