Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02140 ATGGAGACGACACCAAGAGGCAACGGAACCATCTCAGTTTCTTATGATTCCCTTGGGAGGTGGGAAATTTGTGTTAAAAATGATAGAAATGTTGGTTCTTATGGCATTTTCTTAGGAGACAATCCATTCGATTTTGCGCTTCCTGCAACATTGTTCCAACTCCTCATCATTATCACAATCTCTCAAACGCTTCACTTTCTTCTCAGGCCATTACGAACACCAAAATTCATCTGCAGTGTTCTCGGTGGAATTATTTTAGGGCCATCATGTCTAGGGAGAAATGAGTTTTACTGGAAGGCACTATTTCCTCCACGACAAGCTGATGTTTTATTTGTAATCGCATTAGTCGGAGCTATATTTTTTTTATTCTTTATTGCATTGAAAATGGATATAGTAATGACTATAAGAGCAGCAAAAAGTACTTGGAGACTTGGAATAATACCCTTCATGGCTTCTTTTTTGGTTATATCAACACTGCTAAATGTTTTCTATTTACCACAACATTTCTCTCATCTCCAAACAGATGCTTCACGTTCATCATTAAGTGCTACAATAGCATTCAGTAATTTCCCTGTTGTGTCTGATGCTTTAGCAGAACTTAACCTCATAGCCACTGAACTTGGTCAGATTGCTCTGTCTTCAGCTACATTGAACGATTGTATCACTGACCTTATTGGGGTAACGTTTCTTATCGGACCGTTGATTTATGGTTTGGTTATACCGAGTGGACCGCCTTTGGGGACAACATTGGTTGAAAAATGTGAAGTTATTATCACTGAAATTTTGTTACCTTTCTTCTTTGTTAGTGTTGGCATGAGCACAAATCTGCTGAGTGTACTTAACAATTGGCGAGAGTTTTTAACTTTGCAACTTATCTTATTTGCGGGAGACATAGCAAAAGTGGTTGCTTGTGTGTTGGTTTCTTTGACATATAACATTAAGGCCACACATGGCACAGTGCTTGGCCTCATGTTGAACATCAAGGGCATCACTCACCTTATAGCTTTCAGTAAATTGAAGAAAATCAAGCTATTGGATGATGAAACATACAGTCACTTGGTGATGTGTGTGGTGGTTACAACCGCAGTCGTCACACCTTTCGTTAAAATATTATACAAGCATCGTCCTCGAGTACTAAATTCAGATAGTGTTTATCATGCACAAAGGAAATCAATCCAAAACACTCCACGAAATTCAGAGTTTCGTATTATTACTTGTTTACATAGTGAAGGAAATGTGCGTGGTATCACTACCCTATTAGAAGCTTGCAACCCAGCTCCTGAAAGTCCCTTATGTGTCTTTGTGATACACCTAATCGAGCTTTTAGGTCAAAGTGCACCAATTTTGCTTCCCATAAATTACAAGAAAAACAGAAAATTTTTGTCCGTTAATTACCCCGACACAAACTTCATCGTGCGAGCATTTGAGAATTACGCTAAGAACTCTTATGGTCCAGTTATTATTTTACCCTATGTCAATGTAGCACCTTATAAGAGCATGCTTGATGCTGTGTGCAACTTATCACAAGACAAAATGGTTCCTCTTATCGTTATTCCTTTTCATGAAAATGACAATATTGAACTCGGTGGACATGTGTCAAGCTCAATTCGAAAATTGAATACTAGGTTTCAAGCACGCGTGCCTTGCACGTTGGGGATATTGGTTGATCGTTACTCACATCTTGGTGCGACTCGCGATAAGCATTTTTTTCATGTGGGAATATTTTTTGTTGGTGGGCCGGATGACAGAGAAGCATTGGCTTTAGGGATACGAATGTCACAGCGAGCAAATATGAAGGTATCTTTGTTTCGGTTCATTGTGTCGAATAGAAAAGAATTTGAAAGTAAAAGTCAATCAAATGGAGAAGATTCAATGGGAGAGGAAGAACAAGAGGAAATGTTGGATGAAGGTTTAATTGATGAGTTTAAGAGTATGAAATTTGGGATTGGAAATGTTTCTTGGTATGAGATTGTGGTAGAGGATGGAGTAGAGGTAATGGATGCAATTCGTGGTTTGGAAGGAAAATATGACCTTGTGATGGTGGGTAAGAGGCATAATGTTGGTTCTTTGAAAGATGAAGAAATGGGAAATTTCATAGAAAATGTCCAAATTTTAGGAATATTTGGAGATATGTTGTCTTCAACAGAATTTTGTATTGGAACTGTTCCTGTTTTGGTAACACAATGTGGTGGTGACAAAAGGGCAATTAACAAGCTTGATAGAATAGGTTCAAATAATGTCTCTCAGAAAAGTTTAATGTCAAATAAATAA 2271 0.3796 METTPRGNGTISVSYDSLGRWEICVKNDRNVGSYGIFLGDNPFDFALPATLFQLLIIITISQTLHFLLRPLRTPKFICSVLGGIILGPSCLGRNEFYWKALFPPRQADVLFVIALVGAIFFLFFIALKMDIVMTIRAAKSTWRLGIIPFMASFLVISTLLNVFYLPQHFSHLQTDASRSSLSATIAFSNFPVVSDALAELNLIATELGQIALSSATLNDCITDLIGVTFLIGPLIYGLVIPSGPPLGTTLVEKCEVIITEILLPFFFVSVGMSTNLLSVLNNWREFLTLQLILFAGDIAKVVACVLVSLTYNIKATHGTVLGLMLNIKGITHLIAFSKLKKIKLLDDETYSHLVMCVVVTTAVVTPFVKILYKHRPRVLNSDSVYHAQRKSIQNTPRNSEFRIITCLHSEGNVRGITTLLEACNPAPESPLCVFVIHLIELLGQSAPILLPINYKKNRKFLSVNYPDTNFIVRAFENYAKNSYGPVIILPYVNVAPYKSMLDAVCNLSQDKMVPLIVIPFHENDNIELGGHVSSSIRKLNTRFQARVPCTLGILVDRYSHLGATRDKHFFHVGIFFVGGPDDREALALGIRMSQRANMKVSLFRFIVSNRKEFESKSQSNGEDSMGEEEQEEMLDEGLIDEFKSMKFGIGNVSWYEIVVEDGVEVMDAIRGLEGKYDLVMVGKRHNVGSLKDEEMGNFIENVQILGIFGDMLSSTEFCIGTVPVLVTQCGGDKRAINKLDRIGSNNVSQKSLMSNK 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02140 756 Gene3D - 48 221 IPR038770 -
Trre5g02140 756 Gene3D - 222 379 IPR038770 -
Trre5g02140 756 PANTHER CATION/H + ANTIPORTER 221 728 - -
Trre5g02140 756 Pfam Sodium/hydrogen exchanger family 56 221 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02140 Trre-Chr5 16028831 16031979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02140 212 728 Antiporter Super Family AT2G13620 35.227 1.61e-95 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02140 - - gmx:106794183 693.345