Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02139 ATGGAGACGACACCAAGAGGCAACGGAACCATCTCAGTTTCTTATGATTCCCTTGGGAGGTGGGAAATTTGTGTTAAAAATGATAGAAATGTTGGTTCTTATGGCATTTTCTTAGGAGACAATCCATTCGATTTTGCGCTTCCTGCAACATTGTTCCAACTCCTCATCATTATCACAATCTCTCAAACGCTTCACTTTCTTCTCAGGCCATTACGAACACCAAAATTCATCTGCAGTGTTCTCGGTGGAATTATTTTAGGGCCATCATGTCTAGGGAGAAATGAGTTTTACTGGAAGGCACTATTTCCTCCACGACAAGCTGATGTTTTATTTGTAATCGCATTAGTCGGAGCTATATTTTTTTTATTCTTTATTGCATTGAAAATGGATATAGTAATGACTATAAGAGCAGCAAAAAGTACTTGGAGACTTGGAATAATACCCTTCATGGCTTCTTTTTTGGTTATATCAACACTGCTAAATGTTTTCTATTTACCACAACATTTCTCTCATCTCCAAACAGATGCTTCACGTTCATCATTAAGTGCTACAATAGCATTCAGTAATTTCCCTGTTGTGTCTGATGCTTTAGCAGAACTTAACCTCATAGCCACTGAACTTGGTCAGATTGCTCTGTCTTCAGCTACATTGAACGATTGTATACAATTCTTTATCATAATATCACACCATCTCTTGGACACAGAGAAAATAGAATACACAATCTATGGTTTCACTTGTTGGGTATTGTTCATGCTTTTGTCTTTATATATTATACGACCGATCATGAAGAATATTGCACGCAACACACCGGCCGGGAAGCCAGTGAAACAAATTTATGTTGTGTTTATTCTACTTGGCGCGTTGATTATGGCAGGTATCACTGACCTTATTGGGGTAACGTTTCTTATCGGACCGTTGATTTATGGTTTGGTTATACCGAGTGGACCGCCTTTGGGGACAACATTGGTTGAAAAATGTGAAGTTATTATCACTGAAATTTTGTTACCTTTCTTCTTTGTTAGTGTTGGCATGAGCACAAATCTGCTGAGTGTACTTAACAATTGGCGAGAGTTTTTAACTTTGCAACTTATCTTATTTGCGGGAGACATAGCAAAAGTGGTTGCTTGTGTGTTGGTTTCTTTGACATATAACATTAAGGCCACACATGGCACAGTGCTTGGCCTCATGTTGAACATCAAGGGCATCACTCACCTTATAGCTTTCAGTAAATTGAAGAAAATCAAGCTATTGGATGATGAAACATACAGTCACTTGGTGATGTGTGTGGTGGTTACAACCGCAGTCGTCACACCTTTCGTTAAAATATTATACAAGCATCGTCCTCGAGTACTAAATTCAGATAGTGTTTATCATGCACAAAGGAAATCAATCCAAAACACTCCACGAAATTCAGAGTTTCGTATTATTACTTGTTTACATAGTGAAGGAAATGTGCGTGGTATCACTACCCTATTAGAAGCTTGCAACCCAGCTCCTGAAAGTCCCTTATGTGTCTTTGTGATACACCTAATCGAGCTTTTAGGTCAAAGTGCACCAATTTTGCTTCCCATAAATTACAAGAAAAACAGAAAATTTTTGTCCGTTAATTACCCCGACACAAACTTCATCGTGCGAGCATTTGAGAATTACGCTAAGAACTCTTATGGTCCAGTTATTATTTTACCCTATGTCAATGTAGCACCTTATAAGAGCATGCTTGATGCTGTGTGCAACTTATCACAAGACAAAATGGTTCCTCTTATCGTTATTCCTTTTCATGAAAATGACAATATTGAACTCGGTGGACATGTGTCAAGCTCAATTCGAAAATTGAATACTAGGTTTCAAGCACGCGTGCCTTGCACGTTGGGGATATTGGTTGATCGTTACTCACATCTTGGTGCGACTCGCGATAAGCATTTTTTTCATGTGGGAATATTTTTTGTTGGTGGGCCGGATGACAGAGAAGCATTGGCTTTAGGGATACGAATGTCACAGCGAGCAAATATGAAGGTATCTTTGTTTCGGTTCATTGTGTCGAATAGAAAAGAATTTGAAAGTAAAAGTCAATCAAATGGAGAAGATTCAATGGGAGAGGAAGAACAAGAGGAAATGTTGGATGAAGGTTTAATTGATGAGTTTAAGAGTATGAAATTTGGGATTGGAAATGTTTCTTGGTATGAGATTGTGGTAGAGGATGGAGTAGAGGTAATGGATGCAATTCGTGGTTTGGAAGGAAAATATGACCTTGTGATGGTGGGTAAGAGGCATAATGTTGGTTCTTTGAAAGATGAAGAAATGGGAAATTTCATAGAAAATGTCCAAATTTTAGGAATATTTGGAGATATGTTGTCTTCAACAGAATTTTGTATTGGAACTGTTCCTGTTTTGGTAACACAATGTGGTGGTGACAAAAGGGCAATTAACAAGCTTGATAGAATAGGTTCAAATAATGTCTCTCAGAAAAGTTTAATGTCAAATAAATAA 2487 0.3788 METTPRGNGTISVSYDSLGRWEICVKNDRNVGSYGIFLGDNPFDFALPATLFQLLIIITISQTLHFLLRPLRTPKFICSVLGGIILGPSCLGRNEFYWKALFPPRQADVLFVIALVGAIFFLFFIALKMDIVMTIRAAKSTWRLGIIPFMASFLVISTLLNVFYLPQHFSHLQTDASRSSLSATIAFSNFPVVSDALAELNLIATELGQIALSSATLNDCIQFFIIISHHLLDTEKIEYTIYGFTCWVLFMLLSLYIIRPIMKNIARNTPAGKPVKQIYVVFILLGALIMAGITDLIGVTFLIGPLIYGLVIPSGPPLGTTLVEKCEVIITEILLPFFFVSVGMSTNLLSVLNNWREFLTLQLILFAGDIAKVVACVLVSLTYNIKATHGTVLGLMLNIKGITHLIAFSKLKKIKLLDDETYSHLVMCVVVTTAVVTPFVKILYKHRPRVLNSDSVYHAQRKSIQNTPRNSEFRIITCLHSEGNVRGITTLLEACNPAPESPLCVFVIHLIELLGQSAPILLPINYKKNRKFLSVNYPDTNFIVRAFENYAKNSYGPVIILPYVNVAPYKSMLDAVCNLSQDKMVPLIVIPFHENDNIELGGHVSSSIRKLNTRFQARVPCTLGILVDRYSHLGATRDKHFFHVGIFFVGGPDDREALALGIRMSQRANMKVSLFRFIVSNRKEFESKSQSNGEDSMGEEEQEEMLDEGLIDEFKSMKFGIGNVSWYEIVVEDGVEVMDAIRGLEGKYDLVMVGKRHNVGSLKDEEMGNFIENVQILGIFGDMLSSTEFCIGTVPVLVTQCGGDKRAINKLDRIGSNNVSQKSLMSNK 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02139 828 Gene3D - 48 451 IPR038770 -
Trre5g02139 828 PANTHER CATION/H + ANTIPORTER 30 800 - -
Trre5g02139 828 Pfam Sodium/hydrogen exchanger family 56 440 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02139 Trre-Chr5 16028831 16031979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02139 35 800 Antiporter Super Family AT2G13620 34.227 4.61e-143 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02139 - - gmx:106794183 1030.39