Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02120 ATGAGAAAGTGGAAATTCAGCTTCTTTAAGGATCTTAGGAGAGTTATTTGGCTTGTGTTGTTTTGTTTTTTGTTACAGAGTTTTGGATTGTGCTGTTCTTTGAATGATGAAGGTAAAGCACTTTTGAAGTTCAAGCAAGGAATTTTGAGTGATCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAATTTGGTGTTGACCCTTGTAATTGGTTTGGAGTTGAATGTTCAGATGGAAGAGTTGTGGTATTGACGTTGAAAGACCTTTGTCTCGAAGGAAATCTAGCACATGAGCTTGGGAGCCTTGTTCACATAAAGTCTATTGTTTTGCGGAATAATTCTTTTCACGGGATCATTCCTGAAGGAATTGTACGCTTGAAGGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGCGGACCTTTACCTAAAGATATTGGGAGTAATATCTCATTATCAATCCTTTTGCTGGACAACAATGATCTTCTTTGTGGTTTCCCGCATGAAATTAGTGAATTGGTGATGATTTCTGAATCTCAAGTAGATGAAAACCAGCTAATTAGTGCCGGGAAATTGCCAGGTTGTACAGGAAGATCCACCAAATGGCATAATCGCAAAAGTAAAAAAGGTCTTCGGAGGCTACTGCAATCCCGTTTTATTCGTGATGATCCTCATAACCGGGAATCTATTCTTCCTGATAGTCCTTTGGTTTCTCCTTCTCCATCTCCATCCCCATCTCCTTCGCCTTCCCCATCTGCCTCAAAAGCACCAGCAATAGTGCCAAAGCCGGCTTCCCCCAGTCGAAATGTTTCTGATTCTCCTTCCACCTTGCCTTTACCACAATCGAAAAATACCTCATCAAAGAATCACATTCCTATTGTGGCTGGAATTGTGGGTGGTGCTGTATTTATTCTCATTTCAATCATTGTCGTATATCTCTTTAAAACCAACAAGGTAGCTACCGTTAAACCATGGGCTACTGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAGAGATCAGAACTTGAAGCGGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGTCAAGTGTTCAAAGGGACTCTATCCAGCGGTGTCGAAATAGCTGTGGCCTCTGTTACCACGACTTCATTGAAAGATTGGTCGAAGACTTCAGAAGTCCAATTTCGTAAGAAGATAGAAACATTATCAAAGATGAACCACAAGAATTTCGTAAATCTTATTGGATATTGCGAAGAAGACGAGCCTTTCACCAGAATGGCGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAGCATTTACACGTAAAAGAAGCTGAACATTTGGATTGGGGAACAAGACTTAGAGTTGCAATTGGCACGGCTTACTGCCTACAACATATGCACCAGTTGGATCCTCCTTTCGCCCACAGCGACCTAAATTCTTCGTCTGTCCAACTAACTGATGACTACGCTGCCAAAATCTCGGACTTGAGTTTCTTGAACGAAATAACTTCCGTTGATACGAAACCTGTTACTAAGAAACACAACGAGGCGACATTAGCAAGTAACATTTACAGCTTCGGCATTATGTTACTAGAAATTGTAACAGGCCGTGTTCCTTATTCGATGGATAAAGATGGCCCACTTGAAAAATGGGCTTCACACTATTTACAAGAGAACCAGCCTCTCAAAGAAATAGTAGATCCAACACTAGCATCCTTCCAAGAAGAACAATTAGTACAAATCGGTGCATTGATTAAATCTTGTGTCAATGCTGATCAAGAGCAAAGACCAACAATAAAACAAGTTTGTGAGAGATTAAGAGAGATAACAAAAATAAGTCCTGAAGCAGCTGTTCCTAAACTTTCACCACTTTGGTGGGCAGAACTCGAGATTGCTTCTTTTGATGCAAGCTGA 1938 0.4071 MRKWKFSFFKDLRRVIWLVLFCFLLQSFGLCCSLNDEGKALLKFKQGILSDPFDALSNWVDDEFGVDPCNWFGVECSDGRVVVLTLKDLCLEGNLAHELGSLVHIKSIVLRNNSFHGIIPEGIVRLKELEVLDLGYNNFSGPLPKDIGSNISLSILLLDNNDLLCGFPHEISELVMISESQVDENQLISAGKLPGCTGRSTKWHNRKSKKGLRRLLQSRFIRDDPHNRESILPDSPLVSPSPSPSPSPSPSPSASKAPAIVPKPASPSRNVSDSPSTLPLPQSKNTSSKNHIPIVAGIVGGAVFILISIIVVYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGQVFKGTLSSGVEIAVASVTTTSLKDWSKTSEVQFRKKIETLSKMNHKNFVNLIGYCEEDEPFTRMAVFEYAPNGTLFEHLHVKEAEHLDWGTRLRVAIGTAYCLQHMHQLDPPFAHSDLNSSSVQLTDDYAAKISDLSFLNEITSVDTKPVTKKHNEATLASNIYSFGIMLLEIVTGRVPYSMDKDGPLEKWASHYLQENQPLKEIVDPTLASFQEEQLVQIGALIKSCVNADQEQRPTIKQVCERLREITKISPEAAVPKLSPLWWAELEIASFDAS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02120 645 MobiDBLite consensus disorder prediction 190 209 - -
Trre5g02120 645 Gene3D Phosphorylase Kinase; domain 1 327 437 - -
Trre5g02120 645 MobiDBLite consensus disorder prediction 267 287 - -
Trre5g02120 645 SUPERFAMILY L domain-like 32 188 - -
Trre5g02120 645 PANTHER PROTEIN MALE DISCOVERER 2 13 641 - -
Trre5g02120 645 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Trre5g02120 645 Pfam Protein tyrosine and serine/threonine kinase 358 614 IPR001245 GO:0004672|GO:0006468
Trre5g02120 645 MobiDBLite consensus disorder prediction 225 287 - -
Trre5g02120 645 Pfam Leucine rich repeat N-terminal domain 35 77 IPR013210 -
Trre5g02120 645 MobiDBLite consensus disorder prediction 237 257 - -
Trre5g02120 645 SUPERFAMILY Protein kinase-like (PK-like) 338 614 IPR011009 -
Trre5g02120 645 ProSiteProfiles Protein kinase domain profile. 355 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02120 645 Gene3D Ribonuclease Inhibitor 33 214 IPR032675 -
Trre5g02120 645 FunFam Nuclear pore complex protein NUP107 34 194 - -
Trre5g02120 645 Gene3D Transferase(Phosphotransferase) domain 1 438 626 - -
Trre5g02120 645 FunFam Inactive receptor-like serine/threonine-protein kinase 329 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02120 Trre-Chr5 15817956 15821227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02120 18 563 Receptor kinase-like Gene Family AT2G23950 27.509 1.84e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trre5g02120 PK_Tyr_Ser-Thr 5.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02120 - - psat:127084000 1019.99