Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02114 ATGGGAAGTTCAGTGCGTGTTAAAGAAGTTGTGGTAGTGACACCTTCAGAGCCCACACCAAATGGTATCCTATTACTTTCACCACTCGACTCTCAACTTTTTCTTCGTTTCACTATAGAATATCTTCTAATTTACAGGCCCGGCCCGGGCCTAGACAAGGTAACAACAACTTCTCGTTTAAAAGCTGCATTAGCAAAAGCTCTTGTTCCATATTACCCATTAGCTGGAAGAGTACGGCCCAGATCAGATAATAACTTGGGTCTCGAGGTATTATGTAAAGCCCAAGGAGCTGTTTTCATCGAAGCCGTTAGTGACCGTTACACCGTCAATGATTTCGAGAAAGTTCCAAAAACGGTTACTCAATGGAGAAAACTCTTGTCGTTTAGTGTTTCCGACGTTCTCAACGGATCTCCGCCGTTGATTGTTCAACTGACGTGGTTAACCGATGGTGGCGCTGCTTTGGGAGTCGGGTTTAATCACTGTATCTGCGACGGTATTGGTAGTGGCGAATTTCTCAACTATGTTTCTGAATTGGTTTCTGGAAAACGCGGTGGTGCTAAACCGGAACCCGTTTGGGATCGTCATTTGTTCAATGTTTCTCCGATGAATCGAGTTGACTCGGTGAGTCACATTCATCCCGAGTTCAACCGTGTACCAGATCTTTGCGGGTTTATGAATCGGGTCATAAATTGTCTCAGACCAACTTGCATTGTCTTCGATAAGCGACGGTTAAACGATCTCAAATTCGTGGCACGACGCACGTGTCAATTCTCCGAGCCATCGTTTACTTCATTTGAGGTTCTCGCTGCACACGTGTGGAGAAGCTGGGCGAGAGCAATGGGGTTTCCACCGAACCAGATTTTGAAGCTTTTATTTAGCGTAAACGTGAGGAACCGGGTCAAACCGGGTTTACCCGATGGATACTACGGAAACGCATTTGTTTTAGCGTGTGCGCAGACAAGTGCGAGGGAGTTAGGAGAGAGAGGAATCGGATACGGGTCGGGTTTAGTGAAGAGAGCGAAGGAGAGAGTGGATAGTGAGCATGTGAGAAGAGTGGCTGAGTTTGTATCCGAGTCAAGAGCGAGTCCTGAGTTGGTGGGTGTGTTGATACTGTCACAGTGGTCGAGGTTGGGTTTGGACCGGGTTGAGATTGGAATGGAGAAACCGGTTGTGTTGCCCATTTGCAGTGATAGGTACTGTTTGTTTTTGCCGGTGAAGGGTGAAAGAGATAGCGTCAAGGTCATGGTGGCTGTTCCCGCCGCCGCCTTTGATAACTACCACCGTTTTCTCAGGGAATAG 1299 0.4734 MGSSVRVKEVVVVTPSEPTPNGILLLSPLDSQLFLRFTIEYLLIYRPGPGLDKVTTTSRLKAALAKALVPYYPLAGRVRPRSDNNLGLEVLCKAQGAVFIEAVSDRYTVNDFEKVPKTVTQWRKLLSFSVSDVLNGSPPLIVQLTWLTDGGAALGVGFNHCICDGIGSGEFLNYVSELVSGKRGGAKPEPVWDRHLFNVSPMNRVDSVSHIHPEFNRVPDLCGFMNRVINCLRPTCIVFDKRRLNDLKFVARRTCQFSEPSFTSFEVLAAHVWRSWARAMGFPPNQILKLLFSVNVRNRVKPGLPDGYYGNAFVLACAQTSARELGERGIGYGSGLVKRAKERVDSEHVRRVAEFVSESRASPELVGVLILSQWSRLGLDRVEIGMEKPVVLPICSDRYCLFLPVKGERDSVKVMVAVPAAAFDNYHRFLRE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02114 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 419 - -
Trre5g02114 432 Pfam Transferase family 4 423 - -
Trre5g02114 432 Gene3D - 230 429 IPR023213 -
Trre5g02114 432 Gene3D - 2 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02114 Trre-Chr5 15760789 15762087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02114 5 432 Monolignol Biosynthesis Gene Families AT5G48930 26.185 3.62e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02114 - - psat:127083994 724.931