LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g02091	ATGAAGAAACCACCGTCCTCCTCCTCCTTAAACACCCATTTCACCGCCGTCACAGTCATCATCATCTTCTATCTTTCATCTTCTTCCAATGCTTTAGGCTCCGGCACTACCCTCTCCGTCACTGACTCACCCGCCACCGTCTGCGGCATCACATCAGGCCAATCAATACAGACCATTCAGTGTTACCGTCAAGGGAAAATTTTCCCCATCCTCCCCAACGTTTCATTTTCATCAATCTCCGGTGGAAGAAGCTACTTCTGTGGCCTAAGGTCCGGTAACTATAGTTTACATTGTTGGGATATTTCATCGTCGTTTCAAAGTAAAAGACTTTACGTTAATGATTCTGTTTTATTGGAGAATCTCTCCGTTGGAGATTCTCATGTTTGTGCTACGGTGGTCGGAACCGGAACGGTTCGTTGCTGGAGAACTAATGATGATTTTGAACCATCTGGGTCGGACCGATTCGGTTCAATTTCATCTGGGTCGAATTTTTCTTGTGGGATTTTGAAAAATGGTTCAAAAGTTCGGTGTTGGGGTGAGAAAGTTATTGCAGAACGGTTACAGAATGAATTTGGGAATATTTCTATGTTGAGTATTGTAGCTGGTGGTTCACATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGTAAAGGAAGTAATAGTTCTGGACAAATTGATGTTCCACAAGGTGGTGCTTTTGAGTATGGTGATTTGGCACTTGGTGATGAACATGGTTGTGCAATTAGAAGAAAGAATGGTTCTGTTGTTTGTTGGGGTGGAAAAGGGAAATTTTTGGTTAATTTTATTGAAAGTGTTTCTTTTGAATTGATTGTTTCTGCTTCTAATTTTACTTGTGGATTGACAACAACAAATTTTTCTGTTATTTGTTGGGGACCTGGTTGGTCTAATGGATCAAATGGTTCGGAATCTGATGTTTCGTTGTCTCGAATTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTGATTCTCAATCATTGTGTTCTAGCACAAGTCATCATATTTGTAAGCCAAATATCTGTAACACTCAAATAACAAGCCCGCCAACGCAGCCGCCATCTGTTCAACCACCTCCTCCACCACCACCGGTGTCTCCTTCTCGATCGAAGACATTGACAAGGGGACTATTGATTTTTGCAATTGTTGGATCAGTGGGAGGTTTTATTGGTATATGTGCAATAATTTATTGCTTATGGACAGGTGTTTGTTTTGGTAAAAAGAAAGTGCACAATTCTGTGCAACCAACAGTTACAAGAGGGAGTAGCAGCGGTTCAAATACTAGTTCGTCTTCGATTAAATCGGTGATTATGCGTCAAGGTTCGAGAATAATGAGGCGCCAGAGGAGTGGACCTTCGTCAACTAAGCATCAAGAAAGGGCAGAGGAGTTTTCTCTATCTGAGCTTATAGCAGCTACAAACCATTTCTCACTACAGAACAAAATCGGTGCCGGAAGCTTTGGTATTGTGTATAGAGGAAAATTATTCGACGGTCGTGACGTAGCAATCAAGAGAGGCGAAACAGGTTTGAAAGTTAAAAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCTGAATTAGCTTTTTTGTCGCGTTTACACCACAAACACTTGGTTAGACTAGTTGGTTACTGTGAGGAGAAAGATGAGAGGCTTTTGGTGTATGAGTACATGAAGAATGGTTCATTGCATAGTCATTTGCATGATAAGAACAATGTGGAAAAAAGTAGCAGTTTGTTGAATTCATGGAATATGAGGATCAAAATTGCATTGGATGCTTCAAGAGGAATAGAGTATCTGCATAATTATGCAGTTCCTTCAATAATTCATAGAGATATTAAGTCTTCAAATATTCTTCTTGATGCAACTTGGACAGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAATCTGATATCAATTACAAACCAACAAAAACAGCAGGAACAGTTGGTTATATTGATCCCGAGTACTATGGTTTAAACGTGTTAACAGCAAAGAGTGATGTATATGGACTTGGAGTTGTATTACTTGAACTGTTAACAGGAAAAAGAGCTATATTCCGAAACGATGAAGATGAAGGAAATCCATCGAGTCTAGTAGATTTTGCAGTGCCTGCTATTTTAGCTGGTGAATTAGTGAAAATTTTGGACTCGAGAGTTGGACTGCCGGAGGCAGAGAGTAATGAATCGGAGGCGGTTGAGTTAATGGCGTATACTGCTGTACATTGTGTGAATTTGGAAGGGAAAGATAGACCAACTATGGCCGATATTGTTGCGAATTTGGAGAGGGCATTGCTTATTTGTGAAGGTGGTAGTATCAACGAGATTGAAAGCATTTCCAGTGTTACTATCTCTATTGTTTCAGATTGA	2412	0.4022	MKKPPSSSSLNTHFTAVTVIIIFYLSSSSNALGSGTTLSVTDSPATVCGITSGQSIQTIQCYRQGKIFPILPNVSFSSISGGRSYFCGLRSGNYSLHCWDISSSFQSKRLYVNDSVLLENLSVGDSHVCATVVGTGTVRCWRTNDDFEPSGSDRFGSISSGSNFSCGILKNGSKVRCWGEKVIAERLQNEFGNISMLSIVAGGSHVCGLNSTGFLVCKGSNSSGQIDVPQGGAFEYGDLALGDEHGCAIRRKNGSVVCWGGKGKFLVNFIESVSFELIVSASNFTCGLTTTNFSVICWGPGWSNGSNGSESDVSLSRILPGPCVQSSCSECGIYPDSQSLCSSTSHHICKPNICNTQITSPPTQPPSVQPPPPPPPVSPSRSKTLTRGLLIFAIVGSVGGFIGICAIIYCLWTGVCFGKKKVHNSVQPTVTRGSSSGSNTSSSSIKSVIMRQGSRIMRRQRSGPSSTKHQERAEEFSLSELIAATNHFSLQNKIGAGSFGIVYRGKLFDGRDVAIKRGETGLKVKKFQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGSLHSHLHDKNNVEKSSSLLNSWNMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDATWTARVSDFGLSLMSPESDINYKPTKTAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFRNDEDEGNPSSLVDFAVPAILAGELVKILDSRVGLPEAESNESEAVELMAYTAVHCVNLEGKDRPTMADIVANLERALLICEGGSINEIESISSVTISIVSD	803

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g02091	803	Gene3D	Transferase(Phosphotransferase) domain 1	569	783	-	-
	Trre5g02091	803	ProSiteProfiles	Protein kinase domain profile.	488	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre5g02091	803	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4	194	785	IPR044815	GO:0004674
	Trre5g02091	803	FunFam	serine/threonine-protein kinase-like protein CCR1	457	568	-	-
	Trre5g02091	803	SMART	serkin_6	488	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre5g02091	803	Gene3D	Phosphorylase Kinase; domain 1	449	568	-	-
	Trre5g02091	803	SUPERFAMILY	RCC1/BLIP-II	238	304	IPR009091	-
	Trre5g02091	803	ProSitePatterns	Protein kinases ATP-binding region signature.	494	516	IPR017441	GO:0005524
	Trre5g02091	803	SUPERFAMILY	RCC1/BLIP-II	28	261	IPR009091	-
	Trre5g02091	803	SUPERFAMILY	Protein kinase-like (PK-like)	465	775	IPR011009	-
	Trre5g02091	803	MobiDBLite	consensus disorder prediction	363	380	-	-
	Trre5g02091	803	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	619	631	IPR008271	GO:0004672\|GO:0006468
	Trre5g02091	803	MobiDBLite	consensus disorder prediction	428	450	-	-
	Trre5g02091	803	Pfam	Protein kinase domain	489	773	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre5g02091	803	MobiDBLite	consensus disorder prediction	428	470	-	-
	Trre5g02091	803	Gene3D	-	190	349	IPR009091	-
	Trre5g02091	803	Gene3D	-	26	189	IPR009091	-
	Trre5g02091	803	MobiDBLite	consensus disorder prediction	360	381	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g02091	Trre-Chr5	15549490	15551901	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre5g02091	7	803	Receptor kinase-like Gene Family	AT3G55950	57.641	0.0	825

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Trre5g02091		Pkinase	8.6e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g02091	-		-	gmx:100786639	1090.87