Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02045 ATGCTGCAAGAAGTTTTGCCACTACCGGAAGGTGTAAAAATTTTCAAACCCTCCGATTATGTTTTGCTTGGGTTTGGAGGTAGTGGTGCATTTGGTGTTATTCATAAGGTTAAGCACACTGTGTCTGGTGACACATTTGCTCAAAAAACGCTTGATTTTAAAAATGAAAGAGATAAGAGGGATGTGGCTTCTAACGAGTTGGATATATTGAAATCATTGAATAATGAAAATGTGCTTGGCTGTTTAGGTTTGTTTTCAGCTCCGGGTGAGATAAAGATATTGATGGAATTGATGGACTCGGATATGAGGCCTTTTATGAGTAAAGATGAGAAGTTGCTTGCTAAGGTTGCGGTTAAAGTGTTGAGTGGATTGAAATATCTCAGAGAAAACTCGATTTTGCATCTGGATATAAATCCGGCAAATTTGTTAAGGAAATCGGGAACTGATATCATCAAAATTGCCGATTTTGGTTGTAGTATTAATTTGTCTACCGCTGCGGAAAAAGTTGTTTATGAAGTAGGAACTCGACTTTATGGAGCGCCGGAAATCTATTGTAATGGCGGCATTACATTGTCTCCAACATCGCCTCAATCGGTGTTTAGTTGCGATATTTTCAGCTCTGGGGTCTCAATGTTGAAATTTTTTGAAGGGAAACTTCCACCTAATAAATACCCTGTTTGGTACCTTGTCGATCGGAATAAGTTTTGCCTTCCGCATTATATCACGAATGCTTCGGAAAACTTTCAGAAATTTCTTGAGTGTTGCTTGCATAAAGATCCGGCGAAGCGATCTACGGTGGAAGAGTTGCTGGCTCATCCATTTATTACTGAGAATCAGGAGCAGGGATCAACATTCCCCTCACTGAAGGACATGGACTTGCATCAACATCAAGAACAAAAAGATGGGAATTATGCCGAGAAGAAGGGGTTACGTTCTGGTGTTACTTCAGGAGGCTGCATAGTAATCGAAACAGCTGGAGAAGGTGCACTTCCTGAGTTATATAAGGTCATGGAGTCCGGAATCTTGAAAGGGACTAATTCAACTGATCAGAAAGTTGTATGGTTCAGTTCTTAA 1074 0.4022 MLQEVLPLPEGVKIFKPSDYVLLGFGGSGAFGVIHKVKHTVSGDTFAQKTLDFKNERDKRDVASNELDILKSLNNENVLGCLGLFSAPGEIKILMELMDSDMRPFMSKDEKLLAKVAVKVLSGLKYLRENSILHLDINPANLLRKSGTDIIKIADFGCSINLSTAAEKVVYEVGTRLYGAPEIYCNGGITLSPTSPQSVFSCDIFSSGVSMLKFFEGKLPPNKYPVWYLVDRNKFCLPHYITNASENFQKFLECCLHKDPAKRSTVEELLAHPFITENQEQGSTFPSLKDMDLHQHQEQKDGNYAEKKGLRSGVTSGGCIVIETAGEGALPELYKVMESGILKGTNSTDQKVVWFSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02045 357 SUPERFAMILY Protein kinase-like (PK-like) 16 285 IPR011009 -
Trre5g02045 357 Pfam Protein kinase domain 27 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02045 357 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 18 299 - -
Trre5g02045 357 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02045 357 Gene3D Transferase(Phosphotransferase) domain 1 97 314 - -
Trre5g02045 357 Gene3D Phosphorylase Kinase; domain 1 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02045 Trre-Chr5 15225379 15227056 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02045 27 291 MAP Kinase Kinase Gene Family AT3G21220 34.296 9.10e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trre5g02045 Pkinase 5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02045 K13413 - psom:113301319 149.443