Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02035 ATGCAAGAAGTTTTGCCATTACCTGAAGGTATAGAAACTTTCAAACCCTCTGACTATGTTTCATTTGGATATGGAGGTCAAGGTGCCTTTGGTGTTGTCGACAAGGTTAAGCATATTGTGTCTGGTAACACATATGCTCTGAAAAGGTTTACTTTTGAAAATGAGAGAGACAGAGATGTGGCTTCTAACGAGCTGGAAATGTTGAAATCATTGAACCATGAAAATGTACTTGGTTGTTTAGGTCTGCATTCAGCTTCTGGTGAGATACAAATTTTGATGGAACTGATGGACTCAGATATGAAGACTTTTACCAGTAAAGATGACAAATTGCTAGCTAAGGTTGCCGTTAAGTTATTGAGTGGGTTGAAATATCTCAGGGATAACTCGATTTTGCATCTGGATATAAAGCCGGCAAATTTGTTGCGTAAATCGGGTACTGATATCATTAAGATTGCTGATTTTGGTTGTAGTATTAACTTGTCTACCGCTGCCGGCAAAGTTGTTTATAAAGTAGGAACCCGACACTATGCGGCACCGGAAATTTATTGTAATGGCGGCATTACATTGTCTGCAACACCGCATCAATCGGTGTTTGGTTGTGATATTTTCAGCTTTGGACTTTCAATGCTGCAATTTTTTGAAGGGAAACTTCCATTCAGTAGATTTCCTGCTTGGCATCTTATCGATCGGAATAAATTTTCCCTTTCTCATTATATCACGGGTGCTTCAGAAAACTTCCAGAAATTCCTTGATTGCTGTTTGCATAAAGATCCGGTGAAGCGGTCTACGGTGGAAGAGCTCCTGGCCCATCCGTTTATTACCGAGAATCAGGAGCAGGGATCAACATTCCCCTCACTGAAGGACATGGACTTGCATCAACATCAAGAACAAGAAGATGGGAATTATGCCGAGAAGAAGAAGGGGTTACGTTCTAGTGTTACTTCAGGAGGCTGCATAGTAATCGAAACAGCTGGAGAAGGTGCACTTCCTGAGCTATATAAGGTCACGGAGTCCGGAATCTTGAAAGGGACTAATTCAACTGATCAGAAAGTCGTATGGTTCAGTTCTTAA 1071 0.4108 MQEVLPLPEGIETFKPSDYVSFGYGGQGAFGVVDKVKHIVSGNTYALKRFTFENERDRDVASNELEMLKSLNHENVLGCLGLHSASGEIQILMELMDSDMKTFTSKDDKLLAKVAVKLLSGLKYLRDNSILHLDIKPANLLRKSGTDIIKIADFGCSINLSTAAGKVVYKVGTRHYAAPEIYCNGGITLSATPHQSVFGCDIFSFGLSMLQFFEGKLPFSRFPAWHLIDRNKFSLSHYITGASENFQKFLDCCLHKDPVKRSTVEELLAHPFITENQEQGSTFPSLKDMDLHQHQEQEDGNYAEKKKGLRSSVTSGGCIVIETAGEGALPELYKVTESGILKGTNSTDQKVVWFSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02035 356 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02035 356 Gene3D Transferase(Phosphotransferase) domain 1 94 314 - -
Trre5g02035 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 26 297 - -
Trre5g02035 356 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Trre5g02035 356 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02035 356 SUPERFAMILY Protein kinase-like (PK-like) 14 284 IPR011009 -
Trre5g02035 356 Pfam Protein kinase domain 26 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02035 Trre-Chr5 15178510 15180306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02035 11 293 MAP Kinase Kinase Gene Family AT1G51660 35.862 1.01e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trre5g02035 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02035 K13413 - ming:122084522 139.428