Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02034 ATGGATTTCAATGCTTTGTGCTGGGAAGAAGAGAAGGTTTCGATTCCGAAAGGGGTCCCAACATTCGATTGGGACGATTACAAGTGCGTCAAGGAGTTGGGCAGAAGTGGGAAAGGATTTTCTTACAAGGTTCAACAAATTTCGACGGGGGAGTTCTTCGCCATCAAAAAGGTTACGATATCTTCGGATGAGGTACATGATCAAGACCACAAGGATCGTATTATGTTTGATATGATTCTAGCTACATCTATTGATCATCCCAATATTATGAAATGTCTAGGTGTGTGTATGAATCAATGTGGTGTTCATTTTCTCTATAATTGGATGCCTGACAATTTGTGTAATCTTGGTATAATACGAGATGAGTCACATCTTGCTCAAATAGCATATCAGGTTTTGAAAGGGTTAAATTATTTGAGAAACAAACATAGATTCGTGTTTAAGCATCTCACCCCGGGCAATTTATTGTTCGATCCATCCTGCTCCTTAGTTAAGATTGATGATGTTGGGACTGTTAAGGATAGGTATATTTCATTAAACTGGCTTCCTATCCGTTCATGCTATATGAAGTACATTGCCCCGGAGAATTTTCACATAGAAGATATTGATGGTGATGAAGAACAAGACCGTACCCTGCAATCAGATCGATACACTAAAAGCGATGTCTGGAGTTTGGGACTTTGTTTACTGGAATTTTATTATGGGACATTCCCGTTTCATGGTAATGATACAGAGCTTCTGAGGTATCTGTTATCAGGTCTTGATCTTGAATATGGTAAGTTAGAGTTAGATGAATTTCAAAGATTTGGTGTAGACGAGCTTCTTAAACACGACTTCATCACCACTTACTGTGCTGTATTATCTGAACAAGGTGACAGTTCTGATGATGACACCAAAATTTCCGATGAGTCTATATATGAATATGATCACCTGGAATTTCCCACAAGTTCTGAACATGATGATAACATAGAACACCACAACAAGAAACTCAGATTGAGTGCTGAAACTAGTGCATGA 1017 0.3854 MDFNALCWEEEKVSIPKGVPTFDWDDYKCVKELGRSGKGFSYKVQQISTGEFFAIKKVTISSDEVHDQDHKDRIMFDMILATSIDHPNIMKCLGVCMNQCGVHFLYNWMPDNLCNLGIIRDESHLAQIAYQVLKGLNYLRNKHRFVFKHLTPGNLLFDPSCSLVKIDDVGTVKDRYISLNWLPIRSCYMKYIAPENFHIEDIDGDEEQDRTLQSDRYTKSDVWSLGLCLLEFYYGTFPFHGNDTELLRYLLSGLDLEYGKLELDEFQRFGVDELLKHDFITTYCAVLSEQGDSSDDDTKISDESIYEYDHLEFPTSSEHDDNIEHHNKKLRLSAETSA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02034 338 Gene3D Transferase(Phosphotransferase) domain 1 117 285 - -
Trre5g02034 338 MobiDBLite consensus disorder prediction 313 338 - -
Trre5g02034 338 Pfam Protein kinase domain 27 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02034 338 MobiDBLite consensus disorder prediction 313 332 - -
Trre5g02034 338 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 24 282 - -
Trre5g02034 338 Gene3D Phosphorylase Kinase; domain 1 8 107 - -
Trre5g02034 338 ProSiteProfiles Protein kinase domain profile. 27 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02034 338 SUPERFAMILY Protein kinase-like (PK-like) 14 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02034 Trre-Chr5 15174270 15178091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02034 30 280 MAP Kinase Kinase Gene Family AT3G21220 28.309 8.59e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trre5g02034 Pkinase 9.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02034 K13413 K20604 twl:120010199 92.4337