Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02033 ATGGGTAACAATTTGCACCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCAATCTTTTGGAAGCTCAAACATTGTGCTCCAATGATCTTGACATTGGAGGATGCTTACTATGACAATTTGGATTATGTTGACTCTTCAGAAAATAAGTACTGTCAGAAGAACTTGGAACAGATTGCAGGTGGGAAATTTTCCCACGATGCTCTTGGGTTAGCTGTGGCCAAGATGTCATATAATGCATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATAATCAAGTTTCAAGTTCTGGTTTGTCTTTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATGGTTGTTGTGTCTGTAATCCCACTAGGCGTCGTTCAGCTTGGTTCTCTAACAAAAGTGAATGAAGATATAGGGGTTATTAATCATATAAGAAATCTTTTTTTCTCTACTCAAGGTCATTCGATAGACCAGATTCCGAGTCAAATAGAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGGTGTCTTGAAGGAAAATTTGTCTTCAGATATTATGGCTGTGTGCTTACCTGATACCGAGAGAACTATGAGGAATGAAACAGTGGATGTATTGACGCCCCTTCAATGTTCTAGGAGGAACAATTCAACTCATTCTGCTTATTGGGAAATGAGTGATGATATGGTCAAGCATGAAGGACCCGAACTCTATAGTGACGTGAGTCCCATTTTGCTTCAGTCAATGTCCGATATGATTAATGTGGAGCATCAGGAAGGGTCCAGTGGTGTCTGCAAAAATATGAGATTTGACTCGGAACAAATTCTTTCATCATTTTGGAACAATTCTGCTATAAATAATGTTGGTGTTAATGATTTAATATATCAATCAGAAAAGGCCAGAATTGATTCTGCATGCTTTCCAACTGTTTCTATCAATGCTGATACTTGTGAAAGTGGTAAGTTGCCTTATGTGGATACTCAACAAAAAGGGGTGTTGAATATTTCCAAACCTTTAGATGCTAATTCCCATAAACATACCAAAAAGTCGGAGTTTCAAATTGGTTCTTGCGACCAGGACATGTCGTACTTTCAAACTGAGCCGATGAAGTTTCCGGCTGGCTGTGAACTATATGAAGCACTTGGACCGGCTTCTTTGAAAGGGAGTAAATATTTTGATTTGCTAGCACAGGATAATCAAGATATGAAAATTGTGGATATACCGGATGCGATTAACACTAGTCAATTGACTTCTGAATCTCTTCCAGATCATCTTTTGGAAGCAATGGTGGCCAACATTAGTCACAGTAGTAATAATGATGTCAATAGTGAATTATCCTTTTGTAGATCAATGCAATCTGCAATTAGTTCTGGAAAAACACCTGAAGCTTCTATTCACAATATGCATACTATAGATCATCCTTCTCTTGTCAGAGAGGACAAACACCATAGTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCATCTAAAGGTGTTTCTTGTCCTAGTGCTTGTAGTGACCAACTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCTCGGAGAAAGTTGCAGACCTCGTCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTTTTTCTGCAAGGCATAACTAAGCATGCGGACAAGCTAACTAAATTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGATATTCTTGGATCCTCTAGTTCAGAGCAAGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTCGAGAATCTTAGCAAGAATGGACAAATGCTTGTTGAGATGTTATGCGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCTATAAAAAGCTTGGGCCTTACAATTTTGAAGGGTGTAACCAAAGCTCGAGATGAGAAGATATGTATATGCTTTATTGTTGAGGGTGAAAACAACAGAAATATACACAGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGTGTTGTGTATCAACAGTAA 2184 0.3961 MGNNLHQLLRSLCFNTHWNYAIFWKLKHCAPMILTLEDAYYDNLDYVDSSENKYCQKNLEQIAGGKFSHDALGLAVAKMSYNAYSLGEGIVGQVAVTGKHRWICADNQVSSSGLSFEFADGWQSQFSAGIRTMVVVSVIPLGVVQLGSLTKVNEDIGVINHIRNLFFSTQGHSIDQIPSQIESNLKSSSSQPGVLKENLSSDIMAVCLPDTERTMRNETVDVLTPLQCSRRNNSTHSAYWEMSDDMVKHEGPELYSDVSPILLQSMSDMINVEHQEGSSGVCKNMRFDSEQILSSFWNNSAINNVGVNDLIYQSEKARIDSACFPTVSINADTCESGKLPYVDTQQKGVLNISKPLDANSHKHTKKSEFQIGSCDQDMSYFQTEPMKFPAGCELYEALGPASLKGSKYFDLLAQDNQDMKIVDIPDAINTSQLTSESLPDHLLEAMVANISHSSNNDVNSELSFCRSMQSAISSGKTPEASIHNMHTIDHPSLVREDKHHSLSSSSGICGVMSSKGVSCPSACSDQLERSSEPSKNSKKRARLGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQGITKHADKLTKFADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIKSLGLTILKGVTKARDEKICICFIVEGENNRNIHRLDILWPLVQILQSKSVVYQQ 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02033 727 MobiDBLite consensus disorder prediction 522 552 - -
Trre5g02033 727 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 722 IPR043561 GO:0003700|GO:0006355
Trre5g02033 727 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 541 590 IPR011598 GO:0046983
Trre5g02033 727 MobiDBLite consensus disorder prediction 531 552 - -
Trre5g02033 727 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02033 Trre-Chr5 15152029 15156766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02033 1 722 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.327 2.54e-149 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02033 - - mtr:25499239 1014.6