Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02031 ATGGGCTGGGATTGTGTGGTGCTGCAAACAGTTGGAAGAGAACCGCCATTAAAACGGCGAGCAGGGTTGCGGAGGAAACAAGCTGGAAGAGGGATCTTGACATTGGAGGATGCTTACTATGACAATTTGGATTATGTTGACTCTTCAGAAAATAAGTACTGTCAGAAGAACTTGGAACAGATTGCAGGTGGGAAATTTTCCCACGATGCTCTTGGGTTAGCTGTGGCCAAGATGTCATATAATGCATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATAATCAAGTTTCAAGTTCTGGTTTGTCTTTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATGGTTGTTGTGTCTGTAATCCCACTAGGCGTCGTTCAGCTTGGTTCTCTAACAAAAGTGAATGAAGATATAGGGGTTATTAATCATATAAGAAATCTTTTTTTCTCTACTCAAGGTCATTCGATAGACCAGATTCCGAGTCAAATAGAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGGTGTCTTGAAGGAAAATTTGTCTTCAGATATTATGGCTGTGTGCTTACCTGATACCGAGAGAACTATGAGGAATGAAACAGTGGATGTATTGACGCCCCTTCAATGTTCTAGGAGGAACAATTCAACTCATTCTGCTTATTGGGAAATGAGTGATGATATGGTCAAGCATGAAGGACCCGAACTCTATAGTGACGTGAGTCCCATTTTGCTTCAGTCAATGTCCGATATGATTAATGTGGAGCATCAGGAAGGGTCCAGTGGTGTCTGCAAAAATATGAGATTTGACTCGGAACAAATTCTTTCATCATTTTGGAACAATTCTGCTATAAATAATGTTGGTGTTAATGATTTAATATATCAATCAGAAAAGGCCAGAATTGATTCTGCATGCTTTCCAACTGTTTCTATCAATGCTGATACTTGTGAAAGTGGTAAGTTGCCTTATGTGGATACTCAACAAAAAGGGGTGTTGAATATTTCCAAACCTTTAGATGCTAATTCCCATAAACATACCAAAAAGTCGGAGTTTCAAATTGGTTCTTGCGACCAGGACATGTCGTACTTTCAAACTGAGCCGATGAAGTTTCCGGCTGGCTGTGAACTATATGAAGCACTTGGACCGGCTTCTTTGAAAGGGAGTAAATATTTTGATTTGCTAGCACAGGATAATCAAGATATGAAAATTGTGGATATACCGGATGCGATTAACACTAGTCAATTGACTTCTGAATCTCTTCCAGATCATCTTTTGGAAGCAATGGTGGCCAACATTAGTCACAGTAGTAATAATGATGTCAATAGTGAATTATCCTTTTGTAGATCAATGCAATCTGCAATTAGTTCTGGAAAAACACCTGAAGCTTCTATTCACAATATGCATACTATAGATCATCCTTCTCTTGTCAGAGAGGACAAACACCATAGTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCATCTAAAGGTGTTTCTTGTCCTAGTGCTTGTAGTGACCAACTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCTCGGAGAAAGTTGCAGACCTCGTCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTTTTTCTGCAAGGCATAACTAAGCATGCGGACAAGCTAACTAAATTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGATATTCTTGGATCCTCTAGTTCAGAGCAAGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTCGAGAATCTTAGCAAGAATGGACAAATGCTTGTTGAGATGTTATGCGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCTATAAAAAGCTTGGGCCTTACAATTTTGAAGGGTGTAACCAAAGCTCGAGATGAGAAGATATGTATATGCTTTATTGTTGAGGGTGAAAACAACAGAAATATACACAGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGTGTTGTGTATCAACAGTAA 2181 0.4039 MGWDCVVLQTVGREPPLKRRAGLRRKQAGRGILTLEDAYYDNLDYVDSSENKYCQKNLEQIAGGKFSHDALGLAVAKMSYNAYSLGEGIVGQVAVTGKHRWICADNQVSSSGLSFEFADGWQSQFSAGIRTMVVVSVIPLGVVQLGSLTKVNEDIGVINHIRNLFFSTQGHSIDQIPSQIESNLKSSSSQPGVLKENLSSDIMAVCLPDTERTMRNETVDVLTPLQCSRRNNSTHSAYWEMSDDMVKHEGPELYSDVSPILLQSMSDMINVEHQEGSSGVCKNMRFDSEQILSSFWNNSAINNVGVNDLIYQSEKARIDSACFPTVSINADTCESGKLPYVDTQQKGVLNISKPLDANSHKHTKKSEFQIGSCDQDMSYFQTEPMKFPAGCELYEALGPASLKGSKYFDLLAQDNQDMKIVDIPDAINTSQLTSESLPDHLLEAMVANISHSSNNDVNSELSFCRSMQSAISSGKTPEASIHNMHTIDHPSLVREDKHHSLSSSSGICGVMSSKGVSCPSACSDQLERSSEPSKNSKKRARLGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQGITKHADKLTKFADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIKSLGLTILKGVTKARDEKICICFIVEGENNRNIHRLDILWPLVQILQSKSVVYQQ 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02031 726 MobiDBLite consensus disorder prediction 521 551 - -
Trre5g02031 726 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 165 IPR025610 -
Trre5g02031 726 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 28 721 IPR043561 GO:0003700|GO:0006355
Trre5g02031 726 MobiDBLite consensus disorder prediction 530 551 - -
Trre5g02031 726 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 540 589 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02031 Trre-Chr5 15152029 15157015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02031 27 721 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.792 1.03e-134 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02031 - - mtr:25499239 952.584