Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01982 ATGACTCTAAGTGGAAAAAGCCTTTCACCACAATGTGTTGAACTTTATGCTGAGAAGGTTAACAATAGAGGACTTTGTGCCATTTCTCAGGCTGAGTCTCTTCGTTACAAGCTTCTTGGTGGTCTTGCTCTGCGCAGATTGAAATCATTAGTTGTAGATGGAACTTCTCATCATATTATTTATGGGATATCCTTTATCTCTGAATTGATGCAGTATGTATCTTAG 225 0.3822 MTLSGKSLSPQCVELYAEKVNNRGLCAISQAESLRYKLLGGLALRRLKSLVVDGTSHHIIYGISFISELMQYVS 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01982 74 Gene3D - 22 64 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01982 Trre-Chr5 14708320 14709324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01982 13 46 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 94.118 7.94e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01982 K02985 - smo:SELMODRAFT_438700 53.9138