Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01937 ATGGACTTTCCACAACTCACAATGACATTACCTTATGGGCGTCAAGAATCTGTCATGAAGCGCACAACACTTGCGGCTAACATTCCGAACATGCCAATGGCTGCTCATGAAGCTTCAATTTATACAAACCTCTTAATTCTTTCTTTCTCATACATTTTCGCTTCACCTTTCGATATGAGAAATAAGAAGATCCATTGGAGAAATTGA 207 0.3913 MDFPQLTMTLPYGRQESVMKRTTLAANIPNMPMAAHEASIYTNLLILSFSYIFASPFDMRNKKIHWRN 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01937 68 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 44 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01937 Trre-Chr5 14406854 14407060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01937 1 49 Primary Pumps ATPases(2) AT1G78900 73.469 1.88e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01937 K02145 - atri:130802667 74.7146