Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01874 ATGGCTAGCTGCTGCTTTAGGGTCAAAGTTGAGAGTGATCTTACACATGATGATTTGAATTCAAAGGTTCTATCTTCAAGGACTGAGAGTGAGATATCAAAATCCAACAATATTTTGAAGTCTTTCACATTCAATGAGTTAGAAACTGCTACAGGGAACTTTAATCTACTGGATGATCTACTTGGTAAAGGTGAGATAATTAAGGGGTGGATTGATGAACACACACTAGCCCCTACTAAACCAGATACTGGTTTTGCCGTTGCTGTAATGACTCCAAAACAACAAACCTATGCGTTGGAAGACTATGACTATTGGACAATAATCAATCATCTGGGACAACTGCATCATCCTAATCTTCTAAAATTGATTGGATATTGCTCTGAGGATTTCCGCCAGATTTCGGTATATGAATTTTTTACCATGGAAAGTTTGGACAAGTATTTGTCTAGAACAGCAACTTCTAACTTTGAGCCACTCCCTTGGAAAATCCGAATGAAGATAGCTCTTGATGTTGCTAAGGGTCTTGCATATCTTCATAGTGATGAAGTGAACATTATACTTGGAGACTTCGAAACTTCTAAAATCTTGATTGATTCTAATCACAATGCAAAACTATATAATTTTGGGATGGTAAGATCATATGAAGATATGATCGACCCAGATATGATAGATATGATATCTATGCAACGCTCTAGAACATACACGGCACCTGAGTGTAAAGGTGGCCTAACGAAAGAGGGTGATGTATACAGTTTTGGCGTTGTTCTACTGGAAATTATGTTAGGAAGACGCGCATATGATAGTACCAGGAAGCCATTTCGGAAACGTCATTTAGTTGAATGGGCCAAGCCATTACTTTTCTGCAATCTGATATGGACTCATTTGTGGGAAAACAGTATCAAAGGAAGAAAAGCTCCAATTCAGTTTGTTAGAATAAGTTGTTAG 945 0.3778 MASCCFRVKVESDLTHDDLNSKVLSSRTESEISKSNNILKSFTFNELETATGNFNLLDDLLGKGEIIKGWIDEHTLAPTKPDTGFAVAVMTPKQQTYALEDYDYWTIINHLGQLHHPNLLKLIGYCSEDFRQISVYEFFTMESLDKYLSRTATSNFEPLPWKIRMKIALDVAKGLAYLHSDEVNIILGDFETSKILIDSNHNAKLYNFGMVRSYEDMIDPDMIDMISMQRSRTYTAPECKGGLTKEGDVYSFGVVLLEIMLGRRAYDSTRKPFRKRHLVEWAKPLLFCNLIWTHLWENSIKGRKAPIQFVRISC 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01874 314 Gene3D Phosphorylase Kinase; domain 1 27 138 - -
Trre5g01874 314 Gene3D Transferase(Phosphotransferase) domain 1 140 310 - -
Trre5g01874 314 PANTHER OS01G0588500 PROTEIN-RELATED 27 294 - -
Trre5g01874 314 Pfam Protein tyrosine and serine/threonine kinase 64 269 IPR001245 GO:0004672|GO:0006468
Trre5g01874 314 SUPERFAMILY Protein kinase-like (PK-like) 32 288 IPR011009 -
Trre5g01874 314 ProSiteProfiles Protein kinase domain profile. 55 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01874 Trre-Chr5 13934682 13936262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01874 35 302 Glycoside Hydrolase AT3G07070 36.232 1.68e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre5g01874 PK_Tyr_Ser-Thr 3.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01874 - - gmx:100775335 249.595