Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01787 ATGGCTGCAAAGCTTCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGATGTATGACTGGAATATTTCAACTCTTTGATCGTCATCAGATGCTCACCGCTCGCCGGATTAGTCAGAAGAGGCTTCCTTCTGGTAATTTGCACTTCAATGATGGCAGCTTCGAAAGAGATTCTGATAGCATACAGCATCAACAACAAACGGCAACTGAATCAAGCTTAAATAGAGGACTGAATGAAAAGCAAAGAATTTCGACAGAATCATCAAGAGCGTCTTTCTCTTCTTGTTCATCATCAGTGTCCTCTTTGGACTTCAAGGCTGAAGTAGAGACTTCGTTTGAAACTCCTACAAGGGACACATTTATGAACCAACCCTCTATCTCTCCCCGTTTTGGACGTCACTCCCTTGACCTGCGTGATGTGGTGAAGGATTCTATGTATAGGGATCCTCGAGGGCCGTCTGCGAAATCTACGGCCAAAGATCAATCTTCCATTCATGCTGTGAAGCACAGGGATTCTCCGCGACCTCTTCAGATGTCGAAAAATGTTGATAGATCTTACGGAGTTGAAATAGATGAAAAGCAAAGTGTGCCTATTGATCTAAAGGAGTCGATCCGAGTCCTTTCTAAACTTCGAGAAGCGCCTTGGCAGTATGCAGAAAGTACTAGAGAACTTCCGAGATCATCGCATCAAGTAAAAGATGGACACTGGAATTCAGTCTCGAAGGATGCTCCTTGGTTAGCTTATGACGGAAGAGAAACGAGTCGTTTATCTTTTGAATCGCGAGAGACAATCAAATCCACACCCAAGCTAAAAGAGTTTCCTAGGCATTCACTGGATAGTAAGGAAGGTTCGTGGCGCAATTATAACTCGGATTCAAAGCCTAGCAACATCTCGAGAAATGTTTATGGTGCCACCTCCACCTCTACCTCCAATGAAAAATTCTCTAGTCTACAACAGTCTTCATCAACACAGAATCGGCTACCGAGTGTTGTCGCCAAACTAATGGGCTTGGAAGCATTACCTGATTCCTCTTCGGCCGGTGATACTCAATCAGGTTCAACTGAAACTTACTCTGCTCAAGATAACAGCCAGTTTCCACGATCATCGAAAAATGGATTCATTAAACCTCTTCGAGTCTCTAACTCTCCGAAAATCTCATTGAAAGATCCAACTTCCCCTAGACGGAAGAATCCTGATGTGGTTATGAAACCAGTCTCCAGTTCAAAGTTTCCGATTGAACCAGCACCATGGAAGCAGCATGATGCAAATAGAAACCCTCAGAAACAAATTTTAAGGACAACAAAAGTTCCATTAAGAACACAAGATTCATTTCCTTCGGTTTATAGTGAGATAGAGAAGCGATTGAAGGACCTTGAATTCAAACAATCCGGAAGGGATCTTAGAGCACTAAAGCAGATACTAGAAGCAATGCAAGAAAAGGGACTGTTAGAGAGCCGAAAAGAAGAACAAGTTCCAAGCGTGGTTGGAAGTCGAAGTGACTATGAACCTAAAGCTACCAATCTAAATCAGAATTCAAGGTTGGTAAAGCAACAAAATCCTCAGAGAAACAATTTTCTGTCTTCTACAAACAAGGGAAATGATTCCGCAAGAGCTTTTGATTCTCCAATAGTGATAATGAAACCGGCAAAACTTGTGGAGAAATCTGAGATTTCTGCTTCTTCAGCTATTCCAATTGGTGGCTTTTCTGGTTCCAATAATAGAAACAGCATATCTTCTACTCTACTAGCAAAAGAACAGTCTCCAAAGAATATTCGGAGGGACGCTTCTCCGAGTTCCACCGATAAGAAAACAAGTATTACAAAGACTACTAGATCTTTACAATCTCAATCAAGGTCAAACCAATTTCCAAAAGAAAGCCAAAGTTCAGTGAAGAGTTCAGGATCAGTGAGTCCAAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTCTGCCTACACCACCATCAGATTCAAACAAAACAAGAAGGCAATCCAGTATAAAGGCTGCAGAATCAGTTTCTCCAGGTGGAAAAGTTCGACACAAAACTGTCAACTCGCATCACAGCGAAGAGCAACTGAGTGAGATAAGCAATGATTCTCGAAGTTTTTACCAAGGGGATGAAATTTCTCTTCAATCTGACAGCATCACCGTTGACTCGAAATTGGATATTGAAGTCACTAGTAGTTTACGGTCTTCTGAAATCGATGACAGCCAAAGTCCATCCTTGAAGGCTATGAAGAAATTGGTTTCAGACACAGTTCAGAAAAAATCAACACCAAGGTTGGATCAGGATGAGACAATTGCAGAATTTGCATCTATGGGCCCGGAACATCCAAGTCCTAATTCCGTTCTTGATGGATCGGTATACAAAGATGACTTGCAATCGCCAGTAATGCAGACACCTAAAGATCCAAAAGCTGGTAGTGCTCAAGAATCGAACGATAATGAGGTCAAAGATCAATGGAAGCCTGATGACAACCTTTCATTTAACAGCACGGGATCTGGAGAGATAAATCGCAAGAAATTACAAAGCATAGATCATCTTGTTCAGAAGCTTAGACGGCTGAACTCCAATCACGATGAAGCTAGAAACGATTACATTGCTTCCCTATGCGAAAACTCAAATCCAGACCACCGATACATATCTGAAATACTACTAGCCTCAGGTCTCTTACTCAGAGACCTGAATTCTGAATTTTTGACATTTCAGTTACACTCGTCGGGTCATCCTATTAACCCGGAGTTATTCCTTGTCTTGGAGCAGACAAAAGCAAGTAGTTTGCTTTCGAAAGAAGAAAACAACTTTGATGGAAAAGCTGCTTTCTCGAAGCAAACTACAGAGAAATTTCACCGAAAACTCATCTTTGATGCCGTGAACGAAATTCTTGTTGCAAAACTAGGTTACTCTCCTGAGCCATGGTTTCAGCCTAACAAACTCACAAAGAGAAACCTCAGTTCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAAAAAGTTCAAACCAAGAAAACTGAATGCTGCTTAGAAGATGATGAAGAGGATGATGGTCTAAAAAGCATGTTGTGTGAAGATGTGATACATGGTTCAGTATGTTGGGAAGATTTCACTGGTGAAATACCTGGAATTGTGTTGGATGTTGAGAGATTGATATTTAAGGATTTGGTAAATGATATTGTGATTGGTGAAGCAGCTGGTTTGCGAGTCAAGTCATCGGTTCGACGCAGGAAACTATTTGGAAAGTAG 3267 0.4135 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQMLTARRISQKRLPSGNLHFNDGSFERDSDSIQHQQQTATESSLNRGLNEKQRISTESSRASFSSCSSSVSSLDFKAEVETSFETPTRDTFMNQPSISPRFGRHSLDLRDVVKDSMYRDPRGPSAKSTAKDQSSIHAVKHRDSPRPLQMSKNVDRSYGVEIDEKQSVPIDLKESIRVLSKLREAPWQYAESTRELPRSSHQVKDGHWNSVSKDAPWLAYDGRETSRLSFESRETIKSTPKLKEFPRHSLDSKEGSWRNYNSDSKPSNISRNVYGATSTSTSNEKFSSLQQSSSTQNRLPSVVAKLMGLEALPDSSSAGDTQSGSTETYSAQDNSQFPRSSKNGFIKPLRVSNSPKISLKDPTSPRRKNPDVVMKPVSSSKFPIEPAPWKQHDANRNPQKQILRTTKVPLRTQDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQVPSVVGSRSDYEPKATNLNQNSRLVKQQNPQRNNFLSSTNKGNDSARAFDSPIVIMKPAKLVEKSEISASSAIPIGGFSGSNNRNSISSTLLAKEQSPKNIRRDASPSSTDKKTSITKTTRSLQSQSRSNQFPKESQSSVKSSGSVSPRLQQKKLELEKRSRLPTPPSDSNKTRRQSSIKAAESVSPGGKVRHKTVNSHHSEEQLSEISNDSRSFYQGDEISLQSDSITVDSKLDIEVTSSLRSSEIDDSQSPSLKAMKKLVSDTVQKKSTPRLDQDETIAEFASMGPEHPSPNSVLDGSVYKDDLQSPVMQTPKDPKAGSAQESNDNEVKDQWKPDDNLSFNSTGSGEINRKKLQSIDHLVQKLRRLNSNHDEARNDYIASLCENSNPDHRYISEILLASGLLLRDLNSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEENNFDGKAAFSKQTTEKFHRKLIFDAVNEILVAKLGYSPEPWFQPNKLTKRNLSSQKLLKELCFEIEKVQTKKTECCLEDDEEDDGLKSMLCEDVIHGSVCWEDFTGEIPGIVLDVERLIFKDLVNDIVIGEAAGLRVKSSVRRRKLFGK 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01787 1088 MobiDBLite consensus disorder prediction 47 94 - -
Trre5g01787 1088 Pfam Domain of unknown function (DUF4378) 884 1065 IPR025486 -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 504 540 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 801 842 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 148 185 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 347 380 - -
Trre5g01787 1088 Coils Coil 852 872 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 271 286 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 287 329 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 221 240 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 660 677 - -
Trre5g01787 1088 Pfam DUF761-associated sequence motif 320 349 IPR032795 -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 63 94 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 488 540 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 166 181 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 585 707 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 604 644 - -
Trre5g01787 1088 PANTHER LONGIFOLIA PROTEIN 1 1086 IPR033334 GO:0051513
Trre5g01787 1088 MobiDBLite consensus disorder prediction 271 329 - -
Trre5g01787 1088 MobiDBLite consensus disorder prediction 345 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01787 Trre-Chr5 13257856 13262229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01787 134 1087 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.399 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01787 - - gmx:100787391 1533.85