Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01776 ATGGAGGAACATAAACATGTGATGACAACATGTGAACAAGATCAACACATGGTTGCTGCAGCTCAACACATTCTAAAAGCACTAGCTTCAAGCAAAACTATTTCTCATGAGATGAGAAAAACTCTCTTGGATCTTGAGATTCAATTGTCTACAATCAGTGAAAGAAAGGGAAGTGAAATCAAGAAATTAGAGAGAAAGCTTAAATATCTTGAAGATAAGGTAATGAGTTTGGACAAAAATGATTCCATAATATCTTCTGAGTATTTGAAACTTGTTGGTGAAATTCAAACATTGACTCAAACTTTGCAACAAAAGTTTGATTCTTTGAATGAAAATTGGAAGCAAAAGGAACTTGTTCAAAAATCTAATGAAATTTTGCATGTTGTTATGTTAAGGCTTGAGGAAGAGTTGGTTCAAATTCTTGTTAATCATAAGCAATATTTTGAGATTGATTACATGTCTTTCAATTCCAATAGAGTGGATTTGGTTTATGATGAATCATTTGGTTCGGTTGAGGATGAACGAATCAACATGGTGTCGGGGAGAATTGATGATAGTCTATCCGAGGCGAGCAATATAGATTTGGTGAATCCTTCTGCACTTGAAGATCTCAAAAGCATTGCTAAAGCCATGTTTGGTTCAAATTACCAACATGAGTTTTGTCATGTTTTCATTTCTTCTAGGAAAGATGCCTTGGATGAGTACTTTGTCATTCTAGAACTCGAAAAATTAAGCATCGAAAATATGCTAAAAATAGAGTGGCAAGGTTTGAATCGAATGATAAAGAAATGGATTCGAGCGATGAAGTTCATTATTCAGGCATATCTTGTTAGCGAGAAACGATTGTGTAAGCAGATTCTCGGTGACTTTGGATTGGTTTATCAGTATTGCTTCTCCGAAATATCTCGGAGTTCGGTTTTGGACCTTTTAAATTTTGGTGAGGCCATAGCAATGGGAACACATACACCAGAGAAACTGTTCTGTTTACTTGACATGTATGAGGCATTAGAACATGTTGCAGTGGATATAGATTTTTTGTTCATTGAAGAAACAGATTCTTTTATTAGAAGAGAGTTTCATAAGCTTCAAAGAATCATTGTCGAAACGATAAAATCTACATTTCTTTCATTTAGAAATGCTATTGCAACAAATCCATCAAAAAAATGTTTTCCTTGTGGAGGTGTTCATCCTCTTACAAAATATGTCATGAATTACATTAATGCACTTGTTGATTATGGTGATAGCCTTAATCTTCTTGTCGATGAAAGTTCGACCGATCCAACGGATAGCAACGATGAAAGTTCGACTGATCCATTGGCTTGCAACTTAAGGATAATCACTACAACTTTAGAATCAAACTTGTGTAACAAATCTAAGTTATACAATGATGTGGCTTTGCAACATATTTTCATGATGAATAATATTCATTACATGGTGCAAAAGGTTAAGTCTACTAAACTAAGTAATTTCTTCGGAGATTGCTGGCTTCGTCGACATGTTGGCATGTTTCAAAATTATGCTCGAAGTTACGAGAAGGTGAGTTGGTGTTCAGTACTTTCCTTTCTTAGCGACGAAGGTTTGTCGAGTAGTGTCGCGGAGAGAAAAATAAAGAAAAAATGCAAAGATTTTAGTGCTGCTTTTGGTGAAGTATACAAAACACAAACAGGATGGAGTGTACCGGATAAAGAACTTCGCGAAGATTTACAGATATCCGTTTCTCAGAAAGTGATTCCTGCTTATCGAAGTTTTACCGGTAGACACTCGTCTAAAATTGATGAGAAGTGGATCAAGTACACAGTAGATCATCTACAATGCTATATTTTGGATCTTTTTCAAGGTTCATCATCAAAATCTTTGCACCATTTTCAGCATAGAAAGTGA 1881 0.3519 MEEHKHVMTTCEQDQHMVAAAQHILKALASSKTISHEMRKTLLDLEIQLSTISERKGSEIKKLERKLKYLEDKVMSLDKNDSIISSEYLKLVGEIQTLTQTLQQKFDSLNENWKQKELVQKSNEILHVVMLRLEEELVQILVNHKQYFEIDYMSFNSNRVDLVYDESFGSVEDERINMVSGRIDDSLSEASNIDLVNPSALEDLKSIAKAMFGSNYQHEFCHVFISSRKDALDEYFVILELEKLSIENMLKIEWQGLNRMIKKWIRAMKFIIQAYLVSEKRLCKQILGDFGLVYQYCFSEISRSSVLDLLNFGEAIAMGTHTPEKLFCLLDMYEALEHVAVDIDFLFIEETDSFIRREFHKLQRIIVETIKSTFLSFRNAIATNPSKKCFPCGGVHPLTKYVMNYINALVDYGDSLNLLVDESSTDPTDSNDESSTDPLACNLRIITTTLESNLCNKSKLYNDVALQHIFMMNNIHYMVQKVKSTKLSNFFGDCWLRRHVGMFQNYARSYEKVSWCSVLSFLSDEGLSSSVAERKIKKKCKDFSAAFGEVYKTQTGWSVPDKELREDLQISVSQKVIPAYRSFTGRHSSKIDEKWIKYTVDHLQCYILDLFQGSSSKSLHHFQHRK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01776 626 Gene3D Exocyst complex component Exo70 65 620 - -
Trre5g01776 626 Coils Coil 53 80 - -
Trre5g01776 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 613 IPR004140 GO:0000145|GO:0006887
Trre5g01776 626 Pfam Exo70 exocyst complex subunit 262 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre5g01776 626 SUPERFAMILY Cullin repeat-like 86 611 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01776 Trre-Chr5 13147944 13149824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01776 1 612 EXO70 exocyst subunit family AT5G61010 41.483 1.94e-159 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01776 K07195 - gmx:100791622 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01776 5 13147944 13149824 Trre5g01776 5 13147944 13149824 ECH