Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01756 ATGGCCATGAATTGCACAGACAAATCTAAGTGGAATATCATCATCAAGGCCATATTTAGCTTTGTAGTTGGGGTTGCATGTCTTTTCGTTATTTTCCTTATAATCGTCACCGCTATCTCCTCTGTCGAGTTCCACGTAACTGAGGCTTCTCTATCAAAGTTCAACCTCACAAGTAACAACACCTTATCCTACAAATTTGAAGCCAACATCACATTAAGAAATCCCAACAGGGATGTCCAAGTTTACTATAGGAAGGTTACTGCAATTGCATGGTACAAAGATCATGAATTTGCTAGGGTGAATTTGGCATCTTTTGATCAAGGCCACATGAATACCACTGTTCTTAATGTAGTCTTTCAAGGGAAGAGTTTCATCAAACTCAAACCTAAACAACTTTTCAAGTATAATGAAGAGACGCGATTAGGAATCTATAATGACTTGGCTATTGATTTGGAACTTTTAATCCGTTACAAGTATGGAATTTATAAGTCCTATCGCTTCTATCCACCAACAGTGCAATGTCGTCGTTTGAGCCTTTCTTTAGTTTCTAATGGTAACACGCCATCACCACCTTTTCATGGTCACTGTTACGAATCGAAGCACTCGTTCCTCTTCCTCCGACTGAAAACACAAAGTTCAGGTGGTTTAGTGGCGCAAGACGAAGAAGCTACTCTCCGGTGTAGGAAGTCAGAATTGTTGCTGCTGAACATTCTTTTGAGGGTGGAAGGAGTTGTTCCTGTTCCGGTGACCGATAAATGGTCGGAGAAGCAAGCTGAGAAAGAAGAGAGATCTTTGTTTGAGATTCGGTGTGCATCCAACAATTTTGGGACTTAA 834 0.4065 MAMNCTDKSKWNIIIKAIFSFVVGVACLFVIFLIIVTAISSVEFHVTEASLSKFNLTSNNTLSYKFEANITLRNPNRDVQVYYRKVTAIAWYKDHEFARVNLASFDQGHMNTTVLNVVFQGKSFIKLKPKQLFKYNEETRLGIYNDLAIDLELLIRYKYGIYKSYRFYPPTVQCRRLSLSLVSNGNTPSPPFHGHCYESKHSFLFLRLKTQSSGGLVAQDEEATLRCRKSELLLLNILLRVEGVVPVPVTDKWSEKQAEKEERSLFEIRCASNNFGT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01756 277 Pfam Late embryogenesis abundant protein 69 159 IPR004864 -
Trre5g01756 277 PANTHER OS05G0367900 PROTEIN 14 179 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01756 Trre-Chr5 12905782 12912689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01756 40 187 SNARE and Associated Proteins AT1G32270 28.000 5.51e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01756 - - psat:127128902 221.09