Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre5g01725 | ATGGCGCTGTTCCGAAGATTCTTTTACCGGAAACCGCCGGATCGTCTTCTTGAGATCTCCGAGAGAGTCTACGTTTTTGATTGCTGCTTCTCTACGGACGTCTTGGAAGAGGATGAGTACAAAGTCTATATGGGGGGCATTGTAACTCAGCTACAAGATTACTATCCAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAATTGCAGACCTTTTATCTCTGTGTGACATGACAGTTATGGAGTACCCTCGGGAATACGAGGGCTGTCCACTTCTGCCTTTAGAGATGATTCATCACTTCCTACGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGAGGGGGATGGCCCGTGCTGGCGTTTATGCTTGCCGGTCTTTTATTGTACCGAAAACAATACAGTGGGGAGCTGAAGACTCTTGAAATGGTCTACAAGCAAGCACCTAGAGAACTTCTCCAGCTTTTATTACCTTTGAACCCACAACCTTCTCAGTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCTCCATCAGAAACGCCCTTATATTTGGATTGTTTGATTCTAAGAGTTCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCCGGACCCTTCAAATCCTGCCAATAGAAGTTCTAAGCTTCTTTTCTCAACTTCAAAAAATCAAACACACGTTCGCCACTACCTGCAGGCAGAATGTATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTCGTTCTTGAGTGCATACATTTAAGCGAAGATTTCATTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACAGCGTTTGTACGGTCAAATATTTTGGTGCTGAGCCGCGATGAAATGGATATGTTGTGGGATACAAAGGATCAGTTCTCCAAGGATTTTAAATCTGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCAATGTGAGTGGAGATGAAAATGAAACAGAAAGCGGTTCACCTGAGGAATTCTATGAAGTGGAAGAGATCTTCAGCAATGTAATTGATGCACAGGATTCTCCAAGGGTTCGTGACAGTGCGGTAGAAGATGGAAGCCATAAAGATATCTGGAATGAGTATTCAGATCCTCATACTTTTCAGGATTCTACACCAGATGATGGGATTCACCAGCAGGTTGGAGCGACGGATTCTGGTATTAATGAAGTGAAAGACATTACTGTTGATGATGTGAATTACAAGCTCGATGAGCGTGTAGATTCAGATACTCATGTAGTGAAAGATATTGCTGTGGATGATGGGTACAATAAGCCAAGTTCCATTGCAGTCACTTTTGATATGATGGAAACTCCGGAGAGACAGGAAGTCACTTTAGATGCACATGAGGAGTTGGCAGTTATGCAAAACAATTATGATGAAGATAACAACACACCACTAAAAGAATTAGAGCCTGAGGAAGGGAAGCAGATGCATGATCTTCCCAGATCAATGTCTGTTGAAAATAACAAAGATTCCTATCAAGATTCATTGCATGTTTCATATCCACTGACAAGGCATAGTAGTTTACCAAATGCTCTGTTAAATGCCGCCGGTGCAAAGGAGAAAATGACTAATGCTGAAGAAAGACTTATTTCTAGTCCTCATGTCAACGAATCGGCTGATTCTATGGACATGACAAATGATCTGAAAAGTTGTAATAGGAACAATTCCAAATCTTTAGAAAGCATAGGGGAAACAGACTCAAACGCCCAGCTATCATCAATAATGCCAATTACAGAGTCATCTCATCAGACAACTACTCAAACACCACAGTTGAGCACTGATCAAGTGCTACAGCCTCATCCTCCCCCACCACCCCCACCTCCACGCAAATTACCATCTTCTTCCTTGGTTGGCGAAGTGTCTACAATACCGCAACCGCCGCCACAACCGCCACCGCCACCACCTACTTTGACACTATTTGGTAAGAAAAATAAAGAGATGGACTTACAAGCTGCAACTCCTCCTCCTCCACCGCCACCTCCCCCTCCATTTTCTGGGCAAAATAGAGGGAGCTCATTACCACTTTCTAGTCATTGGCAGTCAGTTTATTCATCCATTGGTGAAGTTGGAGAAAATAGTGGTGTTCCTCCACCACCACCACCACCCCCATCTCCTCCCACAAAATATGGAGTTACGTCCGTTCCTCCTCCACCACCTCCCCCGCCTCCTTTGTTTTATATGGATAGAGCTCCACTCCTTCCTCCCTCAACACCAACATCACTTCACACTCCATCCCCGCCACCTTTATGTAAATCTTCACCTCCACTACCATCACCACCACCTCCTCCACCTCCGCCTCCGCCTGTTGTATATAGAGCTTTACCATCAGCACCTTCATCTTCTTTTACTAGAGCCCCACCACCACCTCCTCCACCGCCACCTTCTTTATGTATAGCTCCATCATCTCCACCTTCTATTGGTATAGATACAGCGCCTCCAACTCTTCCTCCATCAAGTGAACAACCTCCACCGCCACCACCGCCACCATATCGTCCTGCAATGTCCAAGGCCCCACCACCACCACCACCACCTCCTTCTTCAATGCCTAAAGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCTACCATCACCGCCACCACCTCCTTCAATGTCTAAAGTCCCACCACCCCCACCACCACCACCATCACCATCACATCTTGCTTCAAATGGAGCACCTCCATCACCACCCCCACCTCCTTCAATGTCTCAGGCTCCACCACCACCACCACCTCCTTCAATGTCTCAGGCTCCACCACCACCACCCCTAACTCCTTCAATGTCTCAGGCTCCACCACCTCCACCTCCACCTCCTTCGATGTCTAAGGCCCCACCACCTCCACCATCACCACCACCACCAAATCTTCCTGCATCAAGCGAAGCACCTCCTTCAATGTCCAAGGCTCCACCACCCCCACCTCCACCACCTCCTTCAATGTCTCCACCACCCCCACCTCCACCATTTTATGGATCTCCATCATCACTACCAACTAATCTTCCTGAATCAAGTGAAGCACCTCAACCACCTCCTTCAACGTCTAAGGCCCCACCACCCCCACCACCACCATCATATCTTCTTGCATCAAATGGAGCACCTCCACCACCACCACCTCCTTCAATGTCTAATCCCCCACCACCCCCACCTCCACCATTCTATGCAGCTCCACCACCACCACCACCACCACCACAATCATATCTTCTTGCATCAAATGAAGCACCGCCACCACCTCCTTCAATGTCTAACCCCCCACCACCCCCACCCCCACCATTCTATGGAGCTCCACCACCACCCTCACCTCCTTCAATGTATAAGGCCCCAACACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCACCACCACATCCTTCAATGTCTAATGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCATCTCCAATGCATGGAGCACGAGCGCCACCTCCTCCACCTCCTCCGGGTGGTGGAGGCCCACCTCCTCCTCCACCTCCAGGTTTTCAAGGCCCACCTCCTCCGCCACCTCCAGGTAGTCGAGGCCCAGCTCCACCACCGCCTCCTGGAGTTGGAGTGCCTGGTGCTCCTGCACCTCCTAGACTTCCAGGTGGTGCACCTCCACCACCTGGAGGTCCGGGAGGAGGGAGAGGGCGTGGACTTGCACGTCCTACAGGTGCTGGTGCTCCTCGAAAATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGAAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAAACTCAAAGTGGACAGGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTCTAAATGCTCCAAAACCAACTGGTAGACCTGGAGGGAACAAACCAGTAGCACCCAAAAATGACAAAATCACCCTGGTTGACTTAAAGAGAGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTTGCTTTGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTTGTTAAATTTTGTCCTACCAAAGACGAAATGGATCTTTTGAAGGGATATACTGGTGACAAGGAAAATTTGGGAAAGTGTGAACAGTTCCTTTTTGAGCTGATGAAAGTGCCACGAGTGGAGTCGAAATTACGAGTATTCTGTTTCAAGATTCAATTTCAGTCTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGACGAGGTCCGAAATTCACTCAAGCTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGAATCCTACACTCCTTGATTTTCACCATGACCTAGGTAGCGTAGAGACTGCCTCTAAGATTCAACTGAAAGCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCATCTGAAAATGATGGCCCAGTGTCTGAAGTTTTCCGTAAGACATTGAAAGGTTTCATTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGATGCACTTGCACAATATTTCGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATGAAGTTGTTTCTCAAAGCACATGAAGAGAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGAAAGCTGAGAAAGAGGCTGGAACGGAGAAGCGTAAAGGCAGTAACTTGACAAGGAAGAGTGGAAAAGATAAAGAAGAAGGAAGCTGA | 5091 | 0.4665 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVTQLQDYYPDASFMVFNFREGDRRSQIADLLSLCDMTVMEYPREYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGELKTLEMVYKQAPRELLQLLLPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGPDPSNPANRSSKLLFSTSKNQTHVRHYLQAECMLVKIDIRCRVQGDVVLECIHLSEDFIREEMMFRVMFHTAFVRSNILVLSRDEMDMLWDTKDQFSKDFKSEVLFLDADAVIPDLTTVNVSGDENETESGSPEEFYEVEEIFSNVIDAQDSPRVRDSAVEDGSHKDIWNEYSDPHTFQDSTPDDGIHQQVGATDSGINEVKDITVDDVNYKLDERVDSDTHVVKDIAVDDGYNKPSSIAVTFDMMETPERQEVTLDAHEELAVMQNNYDEDNNTPLKELEPEEGKQMHDLPRSMSVENNKDSYQDSLHVSYPLTRHSSLPNALLNAAGAKEKMTNAEERLISSPHVNESADSMDMTNDLKSCNRNNSKSLESIGETDSNAQLSSIMPITESSHQTTTQTPQLSTDQVLQPHPPPPPPPPRKLPSSSLVGEVSTIPQPPPQPPPPPPTLTLFGKKNKEMDLQAATPPPPPPPPPPFSGQNRGSSLPLSSHWQSVYSSIGEVGENSGVPPPPPPPPSPPTKYGVTSVPPPPPPPPPLFYMDRAPLLPPSTPTSLHTPSPPPLCKSSPPLPSPPPPPPPPPPVVYRALPSAPSSSFTRAPPPPPPPPPSLCIAPSSPPSIGIDTAPPTLPPSSEQPPPPPPPPYRPAMSKAPPPPPPPPSSMPKAPPPPPPPFYGALPSPPPPPSMSKVPPPPPPPPSPSHLASNGAPPSPPPPPSMSQAPPPPPPPSMSQAPPPPPLTPSMSQAPPPPPPPPSMSKAPPPPPSPPPPNLPASSEAPPSMSKAPPPPPPPPPSMSPPPPPPPFYGSPSSLPTNLPESSEAPQPPPSTSKAPPPPPPPSYLLASNGAPPPPPPPSMSNPPPPPPPPFYAAPPPPPPPPQSYLLASNEAPPPPPSMSNPPPPPPPPFYGAPPPPSPPSMYKAPTPPPPPFYGAPPPPPPHPSMSNAPPPPPPPFYGAPPPPSPMHGARAPPPPPPPGGGGPPPPPPPGFQGPPPPPPPGSRGPAPPPPPGVGVPGAPAPPRLPGGAPPPPGGPGGGRGRGLARPTGAGAPRKSSLKPLHWSKVTRALKGSLWEELQRHGETQSGQEFDVSELEKLFALNAPKPTGRPGGNKPVAPKNDKITLVDLKRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLVKFCPTKDEMDLLKGYTGDKENLGKCEQFLFELMKVPRVESKLRVFCFKIQFQSQITEFNKSLNLVNSACDEVRNSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKNPTLLDFHHDLGSVETASKIQLKALAEEMQAITKGLEKVNQELAASENDGPVSEVFRKTLKGFINEAKSQVDSVTRLYSDVGRNADALAQYFGEDPARCPFEQVTATLLNFMKLFLKAHEENIKQAELEKKKAEKEAEMEKKAEKEAGTEKRKGSNLTRKSGKDKEEGS | 1696 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre5g01725 | 1696 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1271 | 1668 | IPR015425 | - | |
Trre5g01725 | 1696 | PANTHER | FORMIN-J | 1184 | 1673 | - | - | |
Trre5g01725 | 1696 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1344 | 1671 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 573 | 1287 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 573 | 637 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 1656 | 1696 | - | - | |
Trre5g01725 | 1696 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 204 | IPR029021 | - | |
Trre5g01725 | 1696 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 188 | IPR029021 | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 665 | 680 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 779 | 815 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 710 | 730 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 1045 | 1260 | - | - | |
Trre5g01725 | 1696 | SMART | it6_source | 668 | 1696 | IPR015425 | - | |
Trre5g01725 | 1696 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Trre5g01725 | 1696 | Gene3D | Formin, FH2 domain | 1290 | 1682 | IPR042201 | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 693 | 709 | - | - | |
Trre5g01725 | 1696 | Pfam | C2 domain of PTEN tumour-suppressor protein | 199 | 336 | IPR014020 | - | |
Trre5g01725 | 1696 | Pfam | Formin Homology 2 Domain | 1276 | 1642 | IPR015425 | - | |
Trre5g01725 | 1696 | Gene3D | - | 205 | 336 | - | - | |
Trre5g01725 | 1696 | SMART | PTEN_C2_2 | 198 | 1380 | IPR014020 | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 735 | 771 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 823 | 1036 | - | - | |
Trre5g01725 | 1696 | MobiDBLite | consensus disorder prediction | 638 | 654 | - | - | |
Trre5g01725 | 1696 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 336 | IPR035892 | - | |
Trre5g01725 | 1696 | Coils | Coil | 1636 | 1675 | - | - | |
Trre5g01725 | 1696 | Coils | Coil | 1549 | 1576 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre5g01725 | Trre-Chr5 | 12616753 | 12631115 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre5g01725 | 1 | 554 | FH2 protein (formin) Gene Family | AT5G07740 | 59.865 | 0.0 | 707 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Trre5g01725 | 5 | 12616753 | 12631115 | Trre5g01725 | 5 | 12616753 | 12631115 | ECH |