Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01715 ATGAAGATGAAGAAGATTCATTTCAGCAAGATCTATTCATTTAAATTTGGTAAAAAAACAAAGTTTAGAAAAGAGCATTCACAGATTGGAAGACAAGGGTATTCTAGAGTTGTTTTATGTAATGAATTACAAGATAGTTTTGAATCAGATTTGATTAGGAGTTATGCTGATAATTCTGTTAGGTCAACTAAATATACTGTTGCTACTTTTTTCCCAAAGTCATTGTTTGAGCAGTTTAGGAGGGTAGCTAATTTCTATTTCCTTGTTGCTGGTATCTTAGCTTTCACAAAACTTGCTCCTTATACTGCTGTTAGTGCTATTCTTCCGTTATGTATTATCGTTGGAGCAACTATGGTGAAAGAAGGTATTGAAGATTTACGTCGGAAAAAACAGGATATTGAGGTGAACAATAGAAAAGTTATATTTCATAAAGGTGATGGCAGTTTTGAATATACGGAGTGGAAGAATCTCAGGGTAGGAAATATAGTGAAGATAAAGAAGGATGAATTCTTCCCTGCCGACCTTCTACTGCTTTCGTCCAGTTACGAAGATGCAGTCTGCTACGTTGAAACCATGAATTTGGATGGTGAGACAAATTTGAAGCTAAAGCAAGGTTTGGAAGTAACTTCTGCGTTGAATGAGGAAGTTAAACTCCGTGATTTCAAAGCTACTGTCAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTTGGGAGCATGGAATTTGAAGGGCAAAAATATCCTCTTTCTCCTCAGCAGCTTCTTCTCCGAGACTCAAAACTTCGTAATACAGACTACGTATTCGGAGCAGTCATCTTTACCGGCCACGACACAAAGGTTATTCAAAACACTACTGACCCTCCTTCGAAAAGAAGCAAAATCGAGAAGAAGATGGATAAGATTATCTACTTCTTATTTGGTGTTTTGTTTTTAATTGCTTTCGTTGGATCTATTATCTTTGGAATCGTAACTAAACGTGACCTGCACAACGGATTTATGAAAAGATGGTATCTGAGACCAGATGATTCCACCATTTTCTTTGATCCTAAAAGAGTCGCCGCAGCTTCTGTATATCATTTCTTGACGGCTTTAATGCTATATAACTTCTTCATTCCCATCTCCTTGTATTTCTCGATTGAATTGGTCAAAATCCTTCAAAGCATCTTCATTAATCAAGATATCAATATGTACTATGAAGAACTGGACAAACCAGCTCTTGCACGTACTTCAAACTTGAATGAAGAACTCGGCCAAATTGACACGATCCTTTCTGATAAAACTGGAACTTTGACTTGCAACTCGATGGAGTTCATCAAATGTTCTGTTGCCGGGGTAGCTTATGGCCGTGTTGTTACAGAGGTTGAACAAGCCATTGGCAGTATAAGTAATAGTTCACCTATGATTCATGAACATGTTAATAGGTTGGAACGGGTTACAGTTGATACCAAAGAAGCTCATGATCGAAAAGAACCGATCAAAGGTTTTAACTTTGTAGATGAAAGGATAATGAACGGAAACTGGGTTAATGAGCCTCGTGCAGATGTTATACAGAAGTTTTTCCGATTATTGGCTGTTTGTCATACTGCCATACCAGAAGTGGATGATGAAACCGGAAGAGTCACATATGAAGCTGAATCTCCCGATGAAGCAGCATTTGTGATTGCGGCAAGAGAAGTTGGTTTCACATTCTACAAAAGGAGTCAGAATAGTTTATCAATGAAAGAGTTGGATCCTGTTTCTGGCAATGAAGTTGAAAGGACGTACAAGATTCTCCATGTTTTAGAATTCAATAGTTCAAGGAAGCGAATGTCGGTGATAATTAAAGATGAAGAAGGGAGAATTTTACTACTCAGCAAAGGCGCTGACAGTGTCATGTTTGAAAGGCTTGCGCTGAATGGGAGAGATTTTGAGGAGAAAACTTTGGAACATGTGGGCGAATATGCTGATGCAGGTCTAAGAACCCTGATACTAGCCTATCGTGAACTTGATGAAGAAGAATATAATGAGTTTGACAATAAATTTACGGAAGTCAGAAATTCGGTCACCGTAGATCGTGAATCGCTGATTGAAGAACTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCAGTTGAAGACAAGCTTCAAGATGGGGTTCCTGACTGTATTGAAAAGCTTGCGCAAGCTAGAATTAAGATATGGGTTTTGACTGGGGATAAAATGGAAACTGCCATCAACATTGGTTTCTCTTGTCGCTTGCTTCGACAAGGAATGAAACAGATTATAATTCATTTGGAGATTCCCGAAATTCAAGCATTGGAGAAGCATGAAGACAAGATGGCTATCATCAAGGCATCAAGGGAAAGTGTTTATCAACAGATATCTGAAGGTTCTAAACTGCTTTCTGCATCTAAAGGGACCTCCTCTCAGCAAACATTTGCTCTGATAATTGATGGAAAATCACTAGTTTATGCTCTAGAGGATGGTATAAAGAACAAATTTTTAGAGCTTGCAACTCACTGTGCATCTGTCATCTGCTGTCGCTCATCGCCAAAGCAGAAGGCCCTGGTTACTAGACTGGTCAAAGAAGGAACTGGTAAAACAACATTAGCTATCGGTGATGGAGCTAATGATGTAGGAATGATTCAAGAAGCTGATGTAGGTGTTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTCATGTCTAGCGATATTGCAATTGCGCAGTTTCGGTATTTGGAAAGATTGCTTCTTGTGCACGGACATTGGTGTTACCGGAGGATGTCCTCAATGATATGTTTCTTTTTCTACAAGAACATTACATTTGGTTTCACTCTATTCTTATATGAAGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTATCTTTCTATAGTGTCTTGTTTTCTTCACTTCCTGTCATTGCTCTTGGGGTCTTTGACCAAGATGTATCTGCCAGGTACTGCCAGAAGTTTCCTATCTTATACCAAGAAGGTGTACAAAATGTCCTATTTAGCTGGCGCCGAATTCTAAGCTGGATGCTTAACGGATTCATCAGTGCCATAACAATTTTCTTCTTCTGCACAAAAGCGATAGGCCTTCAAGCCTTCGATGAGAATGGAAAAACTGCCGGAAAAGACATGCTAGGAGCAACCATGTATACTTGCGTCGTTTGGGTTGTAAACCTACAAATGGCGCTTGCCGTGCAATACTTCACCTTGATACAACATATTGCCATTTGGGGTTCTATTGCTCTTTGGCATTTCTTCATGTTTGTTTATGGATCATTGCCTTCAAGCTTTTCCACAAATGCTTACAAAGTCTTTGTTGAGACTCTTGCTCCATCTCCTTCCTTTTGGATTGTCACATTATCCGCGGCGGTTTCTTCGCTTATACCATACTTTTCGTTCTCCACGATTAAAATGTGGTTGTTTCCTATGCATCATGAAAGGGTACAATGGATGAGGTATGAGAGCAAGAAGACTGATGAACCTGAATAG 3507 0.3921 MKMKKIHFSKIYSFKFGKKTKFRKEHSQIGRQGYSRVVLCNELQDSFESDLIRSYADNSVRSTKYTVATFFPKSLFEQFRRVANFYFLVAGILAFTKLAPYTAVSAILPLCIIVGATMVKEGIEDLRRKKQDIEVNNRKVIFHKGDGSFEYTEWKNLRVGNIVKIKKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSALNEEVKLRDFKATVKCEDPNANLYSFVGSMEFEGQKYPLSPQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNTTDPPSKRSKIEKKMDKIIYFLFGVLFLIAFVGSIIFGIVTKRDLHNGFMKRWYLRPDDSTIFFDPKRVAAASVYHFLTALMLYNFFIPISLYFSIELVKILQSIFINQDINMYYEELDKPALARTSNLNEELGQIDTILSDKTGTLTCNSMEFIKCSVAGVAYGRVVTEVEQAIGSISNSSPMIHEHVNRLERVTVDTKEAHDRKEPIKGFNFVDERIMNGNWVNEPRADVIQKFFRLLAVCHTAIPEVDDETGRVTYEAESPDEAAFVIAAREVGFTFYKRSQNSLSMKELDPVSGNEVERTYKILHVLEFNSSRKRMSVIIKDEEGRILLLSKGADSVMFERLALNGRDFEEKTLEHVGEYADAGLRTLILAYRELDEEEYNEFDNKFTEVRNSVTVDRESLIEELSDKIERNLILLGATAVEDKLQDGVPDCIEKLAQARIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKHEDKMAIIKASRESVYQQISEGSKLLSASKGTSSQQTFALIIDGKSLVYALEDGIKNKFLELATHCASVICCRSSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADVGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICFFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSFYSVLFSSLPVIALGVFDQDVSARYCQKFPILYQEGVQNVLFSWRRILSWMLNGFISAITIFFFCTKAIGLQAFDENGKTAGKDMLGATMYTCVVWVVNLQMALAVQYFTLIQHIAIWGSIALWHFFMFVYGSLPSSFSTNAYKVFVETLAPSPSFWIVTLSAAVSSLIPYFSFSTIKMWLFPMHHERVQWMRYESKKTDEPE 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01715 1168 FunFam Phospholipid-transporting ATPase 704 910 - -
Trre5g01715 1168 Pfam Cation transport ATPase (P-type) 535 629 - -
Trre5g01715 1168 CDD P-type_ATPase_APLT_Dnf-like 57 1030 - -
Trre5g01715 1168 SFLD Haloacid Dehalogenase 406 921 - -
Trre5g01715 1168 Gene3D - 549 679 IPR023299 GO:0000166
Trre5g01715 1168 SUPERFAMILY HAD-like 419 925 IPR036412 -
Trre5g01715 1168 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Trre5g01715 1168 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Trre5g01715 1168 FunFam Phospholipid-transporting ATPase 546 704 - -
Trre5g01715 1168 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Trre5g01715 1168 FunFam Phospholipid-transporting ATPase 116 286 - -
Trre5g01715 1168 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1148 IPR023298 -
Trre5g01715 1168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 676 IPR023299 GO:0000166
Trre5g01715 1168 Pfam Phospholipid-translocating P-type ATPase C-terminal 898 1148 IPR032630 -
Trre5g01715 1168 Pfam Phospholipid-translocating ATPase N-terminal 53 106 IPR032631 -
Trre5g01715 1168 SFLD p-type atpase 406 921 IPR044492 -
Trre5g01715 1168 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Trre5g01715 1168 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 1159 - -
Trre5g01715 1168 NCBIfam phospholipid-translocating P-type ATPase 55 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Trre5g01715 1168 Gene3D - 117 286 - -
Trre5g01715 1168 Gene3D - 700 910 IPR023214 -
Trre5g01715 1168 NCBIfam HAD-IC family P-type ATPase 842 952 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01715 Trre-Chr5 12532639 12538916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01715 6 1168 Primary Pumps ATPases AT1G68710 70.395 0.0 1749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01715 K01530 - gmx:100798329 1912.5