Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01708 ATGCAAGAATCACTTAATCCAACAACAAACATGAAGAGGTTCCATACTAAGAATCATGATGAACTTGTGTCGGTTTCTAACACTCGTTCTTCCTCAATTTCCAACAGAAAATGTTCTCTTTTCACTTCAACTCGCTTCTTCGCTTCTCTCTTTGTTATCACTCTCTTTCTCTTCTCTCTCTCCTTCATTCTTCCATCTTCTCCACCAACAACTACTGCTACTACTACTCTCAATCTCAAACAAACTCAACAACATGGTTTGAACAATGATGCTTCTGATTCTGGTGAGTTCATAAAAGATAAACTACTTGGTGGACTTCTAGCAGCTGGATTTGACGATAAATCATGTCTAAGCAGGTATCATTCAGTTAAAGGCCTATCAGGAAATCCATCTCCGTACCTCATTTCTAGATTACGAAAATATGAAGCTCTCCACAAAAAATGCAGACCATATACTGAATCCTACAATAAAACGGTGAAAGATCTCGGTTCTGGTCACTTAAGTGAGTCACCAGATTGTAAATACGTAGTTTGGATTTCATTTAGTGGTTTAGGGAACAGGATATTGACCTTAGCCTCTGCGTTTCTTTATGCGCTCCTTACAAACCGGGTTCTTTTGGTTGATCCTGGAGTTGATATGGTCGAACTCTTTTGTGAACCGATTCCAGATGTTTCCTGGTTTCTCCCTCCTGATTTCCCTCTAACCAGTCAATTTCATAGTTTCAATCAGAAATCTGATCACTGTCATGGAAAAATGCTGAAAAATAAAGCAGTCACAAATTCAAAAGTGCTTTCTTCTGTCTACCTTCATTTGGTGCATGATTATGATGATGATGATAAGCTTTTCTTCTGCGATGAAGAACAAAAGTTTCTGCAGAAAGTACCTTGGTTAATGATGAGAACAGATAATTACTTTATTCCATCGCTATTCTTGATGCCGTCTTTTGATCAGGAGCTCGGTAATCTCTTTCCTAACAAGGAAAAAGTTTTCCATTTCTTAGGCAGGTATTTGTTTCACCCTACAAACAAAGTATGGGGATTTGTTACTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAGAGTCGGCATCCAGATTAGGGTTTTCGACACGAGACCCGGTCCATTTCAATATGTACTGGATCAAATCTTAGCTTGTACTATGAAGGAGAATATCTTGCCTAATGTTGACAAGAAGCATGATATTATCAGTTCATTAGGAAATTCAAAGTCGAAAGCGGTGCTAATGACATCCTTAAATTCTGGTTATTTTGAAAAAATAAGAGACATGTATTGGGAATATCCAACGGTGACAGGAGAAGTTATCAGTGTTTCACAACCAAGCCATGAGGGACATCAACAAACTGAGAAGCAAACACACAACCAAAAAGCTTGGGCAGAAATGTATCTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCATGGTCTACTTTTGGCTATGTAGCGCAAGGGCTCGGAGGTCTGAAACCTTGGATACTATACAAACCAGAGAATGAAACAGCGCCTAATCCTCCATGTCGTCGTGTGATGTCGATGGAGCCGTGTTTTCATGCTCCTCCTTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACAGGTGCACTTGTTCCACATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAGCTTGTAGACAATTAG 1689 0.3919 MQESLNPTTNMKRFHTKNHDELVSVSNTRSSSISNRKCSLFTSTRFFASLFVITLFLFSLSFILPSSPPTTTATTTLNLKQTQQHGLNNDASDSGEFIKDKLLGGLLAAGFDDKSCLSRYHSVKGLSGNPSPYLISRLRKYEALHKKCRPYTESYNKTVKDLGSGHLSESPDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVELFCEPIPDVSWFLPPDFPLTSQFHSFNQKSDHCHGKMLKNKAVTNSKVLSSVYLHLVHDYDDDDKLFFCDEEQKFLQKVPWLMMRTDNYFIPSLFLMPSFDQELGNLFPNKEKVFHFLGRYLFHPTNKVWGFVTRYYQAYLANADERVGIQIRVFDTRPGPFQYVLDQILACTMKENILPNVDKKHDIISSLGNSKSKAVLMTSLNSGYFEKIRDMYWEYPTVTGEVISVSQPSHEGHQQTEKQTHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPNPPCRRVMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01708 562 Gene3D - 347 512 - -
Trre5g01708 562 FunFam Galactoside 2-alpha-L-fucosyltransferase 171 222 - -
Trre5g01708 562 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 561 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre5g01708 562 Pfam Xyloglucan fucosyltransferase 76 533 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre5g01708 562 Gene3D - 171 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01708 Trre-Chr5 12479106 12481729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01708 44 560 Xyloglucan Fucosyltransferase1 AT2G03220 61.731 0.0 675