Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01707 ATGGGAAAAGACGCAAAGGGAGGAGGAGGGAAGGGTAAGGGAAAGCAGGCTGCAAGTGGAAGTGATGAGAATGCTTCCAAGGGAAAAGGAAAAGCTGGGAAAGCTGCAGATGGGCTTGGTACTTGCACCTATGTCAAAGCAAGACATATCCTATGTGAGAAACAAGGTAAGATTAATGAAGCCTACAAGAAGTTGCAGGATGGTTGGCTTAGCAATGGAGACAAGGTTCCTCCGGCAGAGTTTGCAAAGGTAGCCCAAGAGTATTCTGAATGTCCATCAGGAAAGAAGGGTGGAGACCTTGGATGGTTTCCACGAGGAAAGATGGCTGGCCCTTTTCAGGAAGTTGCCTTCAACACACCTGTTGGAGTTACTAGTGCGCCTTTCAAATCAACGCATGGCTACCATATTATCTTGTCTGAAGGAAGAAAGAACTGA 435 0.469 MGKDAKGGGGKGKGKQAASGSDENASKGKGKAGKAADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01707 144 MobiDBLite consensus disorder prediction 1 37 - -
Trre5g01707 144 Gene3D - 43 142 IPR046357 GO:0003755
Trre5g01707 144 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 42 141 IPR000297 GO:0003755
Trre5g01707 144 SUPERFAMILY FKBP-like 41 138 - -
Trre5g01707 144 Pfam PPIC-type PPIASE domain 44 137 - -
Trre5g01707 144 PANTHER - 1 144 IPR043323 GO:0003677|GO:0003755|GO:0006364
Trre5g01707 144 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 81 101 IPR023058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01707 Trre-Chr5 12475491 12477136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01707 45 140 Sulfurtransferasese or Rhodanese AT5G19370 32.653 3.35e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01707 K09579 - qsu:111983187 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01707 5 12475491 12477136 Trre5g01707 5 12475491 12477136 ECH