Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01672 ATGGATTCTCTCAAAAATTTCAAAGGCTACGACAAAGTTGAAGACAACCTCGAAGATCCACAAAAACAACAACAACAACAACAACAACAGCACCGACACAAAATCTCCAAACCCCTCATCGCCACAATTTCCATCATCATCGTCATCCTCTTCTTTACCTTCACTCTATCTTTCACCCTTTTCTACCACCACACCACCAACTCAACCGAGTCACAAACCCCTCTCAACTCACTCAACTCAACCGAATCAATCCGATCCGTTTGCAACGTAACTCGCTTCCCTGACTCATGTTTCACCGCCATATCATCCTCCACACAAAACCCCACCGACCCAAAAACCATCCTCAAAATCTCAATCCTCGCATCCATTAACGAACTCAACAATTTCGCTTCATCGCTAAAAGCCAACTCCAACGGACACGTGCTCGGTGATTGCAATGAAATGATTGATGACGCGACGTGGGTTAGTGCCGCGTTGACGGATCAACAAACGTGTGTTGATGGGTTAGAAGAAGTTGGGTTTTCGGTGGATAGTGTTGAAAAGGTAAAGAAAATTATGCAAAGATCAAATGAGTATATTAGCAACAGTTTGGCTATTGTTGCTAATATACGCAATTTGTTACATGTGCCACTTCATTGA 639 0.4319 MDSLKNFKGYDKVEDNLEDPQKQQQQQQQQHRHKISKPLIATISIIIVILFFTFTLSFTLFYHHTTNSTESQTPLNSLNSTESIRSVCNVTRFPDSCFTAISSSTQNPTDPKTILKISILASINELNNFASSLKANSNGHVLGDCNEMIDDATWVSAALTDQQTCVDGLEEVGFSVDSVEKVKKIMQRSNEYISNSLAIVANIRNLLHVPLH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01672 212 CDD PMEI-like_3 86 203 - -
Trre5g01672 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 82 203 IPR035513 -
Trre5g01672 212 Pfam Plant invertase/pectin methylesterase inhibitor 83 199 IPR006501 GO:0004857
Trre5g01672 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 47 198 - -
Trre5g01672 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 78 152 IPR035513 -
Trre5g01672 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 153 205 IPR035513 -
Trre5g01672 212 SMART PMEI_2 79 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01672 Trre-Chr5 12087115 12087834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01672 1 212 Carbohydrate Esterase AT1G53840 28.682 8.17e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01672 - - gmx:100789567 166.007