Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01659 ATGGCTAATATTGAACCAAAACATGTGGTTGTGATACAAGATGCATCTAAACTAAATTTTAAAGTATTTTCTTGGGTTATTAATGGATTATCACTCAAACCAGCAGATATGGTCACCCTATTTGCAATCCTGCATGAAGTTTACAATCCTATGGGGTATAAAAGCATATTAGACAACAATGGACTAGTTGGAGTAAACCAAAGGATCATTGAGGAAGAACTTGCAAGGAAGAAGGAAGAGTATCTAAACCATGAAGAGCTTGCAAGGATTGCTAAATTGTATGAAACAAATGAGGTTGCATTCAAGATACAGTTATATGCAGGATCTTCACCAAAAGATTTTGCTATTGAAGGAGCTAAAAACCTAAAGGCAACTTGGGTTATACTTGACAGGCAAATGAAGAAAGATGAGGAATTTTTCCTGCAGAAGCTTTCTTGTGGTATATCTAGAATATTAGGTAAAACTCGCATCGAACGCCTAAGAGGACCTATTGAACTCGCAGTTGAAATACGATGCAGCAATCATCCTTCTCCCGATAGTTTACCAGAAAGTCAATGTGGAGATGTCCCCAAGAGTCCAATCAATGTCGATGGGACGAGTAAAATTCATTGCAGGTCCGATAAGGATGAAGGGTGCTCAACATTCAGTCCTAACATTAATGAAAAAACATGTGAGACAAGTACTGATCATGCTAGCGTGGATGAAACTGATATAAACAGAAACCAAATCATCGACAAAATAGAAGGAGATAAGCAATGCCATGATGAAGAACATAATGAAAAAATATCTTATGACGATGATAGGGACACAACACTTGTGACTAACAATGATCAAACAAAAGATCTTCATATAAGCCAAGATCAAACAAGAAATGGCTCAGTATGCTCTATGTGCTCCGTTTGCAAAACAAGAAGACCTAATATTGAATGGCAAAAGGAATTTACTTATGAAGAAATTGAATCAGCAACAGATGGATTTTCATTGAAGAATTGTCTCTCTGAAAGTGGAAATCCATTTTCCACTTTCAAAGGCAAGTTAGAGGGAGAGGTGAGAATAGTAGTTAAGCAGCATGAAATAACAAACATTCAAGCAAAGGAAAAAATGAAGTCAGAAGTTCAAACTATTCTCAAAGCTAGACATAACAATGTGGTCATGCTATTAGGTTCATCTACGAAAGACCGTTTCATGTTGATCGTCTATGAGTATGCTTGCAATGGTTCACTTGACATGTATCTATCAAGTGAAAGATGCAGACCATTGGTCTGGAGTGAAAGGCTGAGAGTGGCAATAGGTCTTTGCAGAGGTCTAAAGTATCTACATGATAATAACATCATTCATGGAAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCAAACCACTGCTTGGAGATTTTGACCTTGGAAAAAAACTTGATCCGAAGAAGTCCTTCAATAATAAAAGCATAGGGAATTCTGAATACATAGCACCGGAGTATCTGGAGAAGGGGAAACTATCGACTAAAACAGATGTATACTCGTTTGGTGTTGTTATTTTAGAGTTGATTACAGGACGCAAAGCCAACGATAAAATATCAGGAGAAAAAAGACTAGTTGGATGGGCAAAGCCTCTTCTAGGAAGTAAGAAGTATTCGGAGTTGGTGGATCCTATAATAAGCAAAGCATATGAAGAAGACCAACTTCACTGGTTAGTACAAGTAGTATCAAAATGTCTCAAAAAGAAGCCTAAGGAAAGATTATCTATGAACATGGTTGTTTCGGCATTACAAGGCATAGCTGATAGCGAAGAATGTAACATTACAGAAGTCTTAACTTCACCAACATCAGATTCTACAATTGTGTCTGATATCAATGGTTCACAAGTTACATTACAAGGAATATCAGACAGCAAACAGTGTGACATGACGGAGGACTCTCTTCTAGTTGTATCAAATTCACAATGTAACAAAGAAGTATGTCCAAAAGAAACTGATTATCGAAGTCAGAAAGTTAAGCAGACAGAGCCCTTTTCCTTTGAGGAAGAAAGTAGGCCGCAAAGTTTGGACTTAAAAAACATGATAACAAATCACCTGAGTGAGTTTGAAGAAAATCTGAAGAGAAACCGCAATGAGAATGGAATTTCGACTCAAGAAATTAGTATTAACCACATCATTGGTAAGGATCAGGAAGAGAAGAGCTCTATTCAAGTGAAAAGAGACTTAAGACCTATTAGTGGAATATTACTTCAAACGCAACCGCAGAGTAGCTTCAATGAGAATTTACATGATGAACATCAAGATGAAATCATTTTAGAGAAATCAAAATCCTCGGCATGCTCTATTTGCAAAAGTAAACGACCGAAAATCACAAGGATGAAAGACTTTACTTATGATGATCTCCTAGAAGCTACTAAAGGATTTTCAGTTGAGAACTCTCTATCAGAAAGTGAAAATGGACCTACATTTAAAGGGTTACTAGAGAGTAAAATGAAAATAGTTGTTAAGATACATCAAATTACTAAGTCTCAAGAAGAGAATATATTCAGGTCAGAAATTCAGTTGTTCACCAATGTTAGACACAAAAATGTGGTCATGCTGTTGGGGTTATGTGCAGAGAAAAGTCAATTGATGATTGTGTATGAACATTTATGCAATGGTTCTCTTGACCATTACCTTTCAAGGGGAAGTTTCCAGTCATTGACATGGAAGGAAAGAATGAAAATAACCATAGGTACTGCAAGAGGTTTAAAATACCTACATGGGAATAACATAATTCATGGAAATATAAAAGCAAGTAACATTCTTCTAACACATGACTTTGAACCACTGATTGGAGATTTCGGCTTCAGAAAAACGAAGCTTGAACAGAAGAAGTCCTACAAAGATAAAAGTGCAAAAGATTTTGGATGCACAGCACCCGAGTATACGGAGAATGGTAAATTATCAACTAAGATAGATGTGTACTCCTTTGGAGTGATTCTTTTAGAGCTGATCACCGGCCGGAGGGTAACAGACAAATTACCCGGGGGCAAAAGCCTTGTTGGATGGGCAAAGCCACTACTGGGAGGAAAGAAGTATGCACAATTAGTGGATTCAAAAATCAGTAACTCCTATGAACAAGAACAACTTCAATGGTTAGTCCAAGTAACAGAAAAATGTCTCAAAAAGAATCCTAAGGAAAGATATTCAATGAATATGGTTATATCTGCATTACAAGGAATCTCAGAATCAGACGACAGTTGTCTAATCGAAGATTCTTCTTCAGAAAACTCATATTTACCAAATGATGAGCCGGTCATGCCCACAACTAGTTCACAAGGTGAAATGCCGGTTGGTTCAGTAAGCCGGGAAACAAAACTGGTTGACACAAACACATACAAGGAAGAGACAAGCTCCAAAACAGAAACTAGAACTAATGACATGATTGAAAAGATTAAGGAAAATCAACAAAACAAAGAAAGATTCCACACGGAAGAGAATGAGATAGAGAAAACAGCAGTAGATAACCAACAAAAGATTATCCAGGACACAAAACAAATGCAAGACAGCTGTGATGATAAGGGTTTTTGGAATGAGAATCAAAACAAAACAATTTTGGAGAATATTTCAAAGTCTAGTTTATGCTCAATCTGCAAAAGTAGGCGGCCAAATAATGAGTCGCAGAGGAAATTTACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCAATAAAGTATTCTCTATCTGAAGGTGAATATGGACCTGCCTTCAAAGGTCAGTTAGATAATAAGCTGAAAATAGCTATTAAGAAAATTCAAGTCACAAGCTTACAGGAACAGAAGGAGTTTATGTCAGAAGTCCAGTTGCTCATAAATACAAGACATGAAAACATGATTATGCTTCTAGGGCAAAGTGGTAGATTGTTGACTTGGAGAGAAAGGATGAAAATTGCAATAGGTGTATCAAGAGGCCTGAAGTATCTTCATGAGAATGACATAATACATGGAAGAGTGAAACCAAGTAACATTCTTCTAAATCATGACTATAAGCCATTGCTCGGAGATTTTGTGCTTAGAAAAGACGGACGTGAATTGAAGAATATCTGCAAGGATAAAAGTGTTAGGAATTGTGGATATACTGCACCAGAGTGTAAGGAGAGTGGAAAACTATCAACAAAAGCAGATGTCTACTCTTTTGGAGTAGTTCTTTTAGAGTTGATCACAGGCTCGATGGTTTCAGATAAGATACATGGACAGAAATGTCTTATTGAATGGGCAAGGCCACTTCTTGGTGGAAGGGAGTACTTACAGTTGATGGATCCCGAAATCAGCAGCTCATATGATGAAGAAGAACTTGCTGCATTGGTCCTAATAACAGAAAAGTGTCTCAGAAAGAATCTCAAGGAAAGGTTTACAATGAATATGGTGGTCTCGTTAATGCCGTCCATAGTTGATAGCAATAACATCTACGTAATTGAAGACTCTTCATCAGATTCAGATGACTTATGTTGCTATTCAGATGAAACAAACTCAGAAGAAGAAGATTTAGCCACAAAGATTGGTGAAGAAAGAGTGGACAACAAGGCATGTAGAAAAGAGAATGAAACAAAATTTGATGAAAAGAACTATTGGTGCAAAACTAGAGGCAAAAACTGTATGGAAACACAAGAAAAAGAAAGATGTGAATCTTATGGTGGAGCTAAAGACTTTTTTCTAGATGGAGCTCAAGAATATATAGCATGTGGAGAATTGTTTAGCTTGTGTAACTCAATTTAA 4740 0.3673 MANIEPKHVVVIQDASKLNFKVFSWVINGLSLKPADMVTLFAILHEVYNPMGYKSILDNNGLVGVNQRIIEEELARKKEEYLNHEELARIAKLYETNEVAFKIQLYAGSSPKDFAIEGAKNLKATWVILDRQMKKDEEFFLQKLSCGISRILGKTRIERLRGPIELAVEIRCSNHPSPDSLPESQCGDVPKSPINVDGTSKIHCRSDKDEGCSTFSPNINEKTCETSTDHASVDETDINRNQIIDKIEGDKQCHDEEHNEKISYDDDRDTTLVTNNDQTKDLHISQDQTRNGSVCSMCSVCKTRRPNIEWQKEFTYEEIESATDGFSLKNCLSESGNPFSTFKGKLEGEVRIVVKQHEITNIQAKEKMKSEVQTILKARHNNVVMLLGSSTKDRFMLIVYEYACNGSLDMYLSSERCRPLVWSERLRVAIGLCRGLKYLHDNNIIHGNIKPSNILLTHDFKPLLGDFDLGKKLDPKKSFNNKSIGNSEYIAPEYLEKGKLSTKTDVYSFGVVILELITGRKANDKISGEKRLVGWAKPLLGSKKYSELVDPIISKAYEEDQLHWLVQVVSKCLKKKPKERLSMNMVVSALQGIADSEECNITEVLTSPTSDSTIVSDINGSQVTLQGISDSKQCDMTEDSLLVVSNSQCNKEVCPKETDYRSQKVKQTEPFSFEEESRPQSLDLKNMITNHLSEFEENLKRNRNENGISTQEISINHIIGKDQEEKSSIQVKRDLRPISGILLQTQPQSSFNENLHDEHQDEIILEKSKSSACSICKSKRPKITRMKDFTYDDLLEATKGFSVENSLSESENGPTFKGLLESKMKIVVKIHQITKSQEENIFRSEIQLFTNVRHKNVVMLLGLCAEKSQLMIVYEHLCNGSLDHYLSRGSFQSLTWKERMKITIGTARGLKYLHGNNIIHGNIKASNILLTHDFEPLIGDFGFRKTKLEQKKSYKDKSAKDFGCTAPEYTENGKLSTKIDVYSFGVILLELITGRRVTDKLPGGKSLVGWAKPLLGGKKYAQLVDSKISNSYEQEQLQWLVQVTEKCLKKNPKERYSMNMVISALQGISESDDSCLIEDSSSENSYLPNDEPVMPTTSSQGEMPVGSVSRETKLVDTNTYKEETSSKTETRTNDMIEKIKENQQNKERFHTEENEIEKTAVDNQQKIIQDTKQMQDSCDDKGFWNENQNKTILENISKSSLCSICKSRRPNNESQRKFTYEELQAATEGFSIKYSLSEGEYGPAFKGQLDNKLKIAIKKIQVTSLQEQKEFMSEVQLLINTRHENMIMLLGQSGRLLTWRERMKIAIGVSRGLKYLHENDIIHGRVKPSNILLNHDYKPLLGDFVLRKDGRELKNICKDKSVRNCGYTAPECKESGKLSTKADVYSFGVVLLELITGSMVSDKIHGQKCLIEWARPLLGGREYLQLMDPEISSSYDEEELAALVLITEKCLRKNLKERFTMNMVVSLMPSIVDSNNIYVIEDSSSDSDDLCCYSDETNSEEEDLATKIGEERVDNKACRKENETKFDEKNYWCKTRGKNCMETQEKERCESYGGAKDFFLDGAQEYIACGELFSLCNSI 1579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01659 1579 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 877 1076 - -
Trre5g01659 1579 FunFam Proline-rich receptor-like protein kinase PERK8 288 402 - -
Trre5g01659 1579 SUPERFAMILY Protein kinase-like (PK-like) 1213 1466 IPR011009 -
Trre5g01659 1579 MobiDBLite consensus disorder prediction 1075 1107 - -
Trre5g01659 1579 SUPERFAMILY Protein kinase-like (PK-like) 784 1070 IPR011009 -
Trre5g01659 1579 FunFam Proline-rich receptor-like protein kinase PERK8 763 876 - -
Trre5g01659 1579 ProSiteProfiles Protein kinase domain profile. 316 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01659 1579 PANTHER OS01G0253100 PROTEIN 693 1071 - -
Trre5g01659 1579 Coils Coil 685 705 - -
Trre5g01659 1579 Gene3D Phosphorylase Kinase; domain 1 762 876 - -
Trre5g01659 1579 Gene3D Phosphorylase Kinase; domain 1 1191 1290 - -
Trre5g01659 1579 ProSiteProfiles Protein kinase domain profile. 801 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01659 1579 Coils Coil 67 87 - -
Trre5g01659 1579 Gene3D Transferase(Phosphotransferase) domain 1 877 1087 - -
Trre5g01659 1579 Gene3D Transferase(Phosphotransferase) domain 1 404 611 - -
Trre5g01659 1579 ProSiteProfiles Protein kinase domain profile. 1230 1471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01659 1579 Pfam Protein kinase domain 1299 1465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01659 1579 Pfam Protein kinase domain 352 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01659 1579 SUPERFAMILY Protein kinase-like (PK-like) 310 613 IPR011009 -
Trre5g01659 1579 Gene3D Phosphorylase Kinase; domain 1 301 402 - -
Trre5g01659 1579 FunFam Lectin-domain containing receptor kinase A4.3 403 608 - -
Trre5g01659 1579 Gene3D Transferase(Phosphotransferase) domain 1 1291 1480 - -
Trre5g01659 1579 Pfam Protein tyrosine and serine/threonine kinase 804 1064 IPR001245 GO:0004672|GO:0006468
Trre5g01659 1579 Pfam Protein tyrosine and serine/threonine kinase 1232 1291 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01659 Trre-Chr5 11977953 11985904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01659 314 590 Trihelix Transcription Factor Family AT5G38560 39.310 7.19e-55 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Trre5g01659 PK_Tyr_Ser-Thr 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01659 - - tpra:123916481 2779.2