Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01629 ATGGGTTGGAGATGTAGCTATGTTGTTGTCTTAGTAACTCTAATGCTTCTTCTGCCATTTATGGTTTCTTCTGCTTCTATTGTCAAAAATCTTCCTGGTTTTGATGGGGATCTTCCATTCAAGCTTGAAACTGGATACATTGGAGTGGGAGAAGGAGCAAAAGTTCAAATATTTCACTATTTTGTGGAGTCTCAAAGAAATCCATTCATTGATCCAATTTTACTTTGGTTTGTTGGTGGTCCTGGATGCTCTGCCCTTTCTGCATTCTTTTTTGAAAATGGGCCTTTAACAATGGAAGAGAATTACAGTGAAAATCTTCCAAAGCTTAAATTGAATCCATATGGTTGGACACATATGTTGAATATGTTATACATAGATATGCCAGTAGGGACTGGATTTTCTTACTCAGAAACACAAGAAGGCTACTATAGCAATGACACAATTTGGGTGGAACATACATATTCTTTTTTACAAAAGTGGTTTATTGATCATCCAAAGTTTAGCTCAAATTCATTTTACATTGGTGGTGGCTCATATTCAGGAATAACTACTGGTCCTCTTGTTCAAAAATTATACGAAGGATACATAGCAAAAACTGTGCCACACATAAACATCAAAGGTTATGTGATTGCAAGCCCGGCCGTTGACATATATCAGCCTATCAACACAAAAGTTTTGTATGCATACTATATGACTCTAATACCAAAAGAACTCTATGAGTCATTGGAAGAAAATTGTAAGGGTAATTATGTAAACATTGATCCAGATAACACAAAGTGTCTCTCAGATTATGAAGATTTTTCTCAGCTAATTCGTTATATAAACGGACAACAAATTTTAGAACCTCTCTGTATCACTACACCTGCATTGAACCATGTAATTAAACAACCAGTTCAAGAAGATCAAGAATTACAGTGTAGAAGTTTTTATCATGTTCTTGTTAATGTATGGGCAAACGATGAAAATGTGCGGAAAGCTCTTCATGTCAGAGAGGGAACTAAAGGGGAGTTCTTGAGGTGCAACAACACTTTGGCCTACACAAAAAATCTAAAAGATGTTGTAGAATATTATCACAATCTAACCAATGCCAACATCCAAGCTCTCGTATATTGTTCTGATCTTGACATGTCAGTACCACACATTGGTACACAATCTTGGATCAAGTCATTCAACATGAGCATACATGACAAATGGCGTGCATGGTTTGTCGAAGGTCAAGTGGCCGGGTTCACAGAAATCTACAAAATGAAAGAAGACCACTACTTAACATATGTGACCGTGAAGGGTGCTGGACATGTGGCTCATACATTCAAGCCCAAGGAAGTTTATAACATGATTAAGAGGTGGTTTTCATTTTCTCTTATCTAA 1368 0.3662 MGWRCSYVVVLVTLMLLLPFMVSSASIVKNLPGFDGDLPFKLETGYIGVGEGAKVQIFHYFVESQRNPFIDPILLWFVGGPGCSALSAFFFENGPLTMEENYSENLPKLKLNPYGWTHMLNMLYIDMPVGTGFSYSETQEGYYSNDTIWVEHTYSFLQKWFIDHPKFSSNSFYIGGGSYSGITTGPLVQKLYEGYIAKTVPHINIKGYVIASPAVDIYQPINTKVLYAYYMTLIPKELYESLEENCKGNYVNIDPDNTKCLSDYEDFSQLIRYINGQQILEPLCITTPALNHVIKQPVQEDQELQCRSFYHVLVNVWANDENVRKALHVREGTKGEFLRCNNTLAYTKNLKDVVEYYHNLTNANIQALVYCSDLDMSVPHIGTQSWIKSFNMSIHDKWRAWFVEGQVAGFTEIYKMKEDHYLTYVTVKGAGHVAHTFKPKEVYNMIKRWFSFSLI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01629 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Trre5g01629 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Trre5g01629 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Trre5g01629 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Trre5g01629 455 FunFam Serine carboxypeptidase-like 19 21 289 - -
Trre5g01629 455 SUPERFAMILY alpha/beta-Hydrolases 28 451 IPR029058 -
Trre5g01629 455 FunFam Carboxypeptidase 304 453 - -
Trre5g01629 455 Pfam Serine carboxypeptidase 32 451 IPR001563 GO:0004185|GO:0006508
Trre5g01629 455 Gene3D alpha/beta hydrolase 22 293 IPR029058 -
Trre5g01629 455 Gene3D - 306 453 - -
Trre5g01629 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 439 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01629 Trre-Chr5 11829352 11833569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01629 22 51 Calmodulin-binding Proteins AT2G22960 66.667 3.49e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01629 K16296 - qsu:112035786 484.182