Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01619 ATGGTGATGATCACTCAATACCAAACCTTCCTTTTCAAAGAACTTTCTATCTCCTTTTTCATTTTCTTGATAACCCGTTTCATCATAAGTTTTCTCTTCAAAAAAAATCTCAAAAAACTTCCACCAGGCCCAAAGGGTTTTCCAGTTGTTGGTGCACTCCCACTAATGGGATCCATGCCTCATGTTACCCTATTCAAAATGTCACAAAAATATGGTCCCATAATGTACCTAAAAATGGGATCAAATAGCATGGTTGTAGCATCAACTCCTTCTTCAGCCAAAGCATTTCTCAAAACACTTGACCTAAATTTCTCCAATAGACCGCCGAACGCTGGCGCGACTCACCTAGCTTATGATTCACAAGACTTGGTTTTCGCCGACTATGGATCTAGGTGGAAATTACTTAGGAAACTAAGTAACTTGCACATGCTCGGCGGAAAAGCCCTCGAAGATTGGTCGAAAGTTCGTGAGATTGAAATGGGTCACATGATTCGTACAATGTATGATTGTAGCAAGAAAGACAAATCCGTTGTTGTGGCCGAAATGTTGACATATGCTATGGCCAATATGATAGGTCAAGTTATATTGAGCCGTCGCGTGTTCGAGACAAAAGGTAGTGACTCAAATGAATTTAAGGATATGGTTGTTGAGCTCATGACAACTGCTGGATATTTTAACATTGGTGATTTTATACCACTTCTTGCTTGGTTGGATCTTCAAGGAATTGAACGAGGGATGAAAAGTTTACACAAAAAGTTTGATGCTTTGTTGACAAAGATGATTGAGGAGCATGTGGCTTCTGGTCAAAAAAGTCCTAGGGTTAAGCCTGATCTCTTAGACACTCTCATTGCTCAAAGTAAGGAAGATTGTAATGGGGAGAAATTAACACTCACTAACATCAAGGCATTACTCTTGAACCTATTTACTGCAGGAACAGATACATCTTCAAGTATCATTGAATGGTCCCTAGCAGAAATGTTGAAGAATCCCAAAATAATGCAAAGAGCTCATGAAGAAATGGACAAAGTAATAGGCAAAGATCGTCGCCTACAAGAATCAGACATTCAAAAACTTCCTTATTTACAAGCAATTTGCAAAGAAACATATAGAAAACATCCTTCAACACCATTAAACTTGCCAAGAGTTTCGTCACAACCATGCGAAGTAAATGGATATTACATACCAAAAAATACAAGGCTAAGTGTGAACATTTGGGCCATAGGAAGAGACCCAAATGTGTGGGAGAATCCTTTGGAATTTAATCCTGAAAGGTTTCTAAGTGGTAAAAATGCTAAAATTGAGCCGCGTGGAAATGATTTTGAGTTGATTCCATTTGGTGCGGGGAGAAGAATTTGTGCCGGGACAAGAATGGGGATTGTGCTTGTTCAATACATTTTGGGAACTTTGGTGCATTCATTTGATTGGAAGTTACCAAAAAGTGTTGTGGATTTGAACATGGATGAGTCATTTGGGCTTGCTTTGCAGAAAAAAGTTCCTCTTGTTGCTTTTATTAGCCCAAGATTGTCTCGATCTGCTTATATTCCTTAG 1548 0.3895 MVMITQYQTFLFKELSISFFIFLITRFIISFLFKKNLKKLPPGPKGFPVVGALPLMGSMPHVTLFKMSQKYGPIMYLKMGSNSMVVASTPSSAKAFLKTLDLNFSNRPPNAGATHLAYDSQDLVFADYGSRWKLLRKLSNLHMLGGKALEDWSKVREIEMGHMIRTMYDCSKKDKSVVVAEMLTYAMANMIGQVILSRRVFETKGSDSNEFKDMVVELMTTAGYFNIGDFIPLLAWLDLQGIERGMKSLHKKFDALLTKMIEEHVASGQKSPRVKPDLLDTLIAQSKEDCNGEKLTLTNIKALLLNLFTAGTDTSSSIIEWSLAEMLKNPKIMQRAHEEMDKVIGKDRRLQESDIQKLPYLQAICKETYRKHPSTPLNLPRVSSQPCEVNGYYIPKNTRLSVNIWAIGRDPNVWENPLEFNPERFLSGKNAKIEPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFDWKLPKSVVDLNMDESFGLALQKKVPLVAFISPRLSRSAYIP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01619 515 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 FunFam Flavonoid 3',5'-hydroxylase 2 32 504 - -
Trre5g01619 515 CDD CYP75 72 507 - -
Trre5g01619 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Trre5g01619 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01619 515 PANTHER CYTOCHROME P450 98A9 21 512 - -
Trre5g01619 515 Gene3D Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01619 Trre-Chr5 11768888 11773700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01619 11 513 Cytochrome P450 AT5G07990 48.723 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01619 K13083 - gmx:547705 819.305