Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01616 ATGACTTTTGATTTGTTTCTTCTTAGAGATATTGGTATTTCACTTTTCATTTTCTTAATCTCACACTTCTCCATAAGCTTAATACTCAAAAACACTTCTAAAAATCTCCCACCAGGCCCTAAAGGATGGCCAATTCTTGGTGTTCTACCACATTTAGGAACCATGCCACATGTCACACTAGCAAACATGGCCAAGAAATTTGGACCCATCATGTACCTCAAAATGGGCACTTGTGACACTATTGTTGCCTCAAGTCCAAAGGTAGCTAGAGCATTTCTAAAGACTTTGGATCACAATTTCCTAAATAGGCCCACTATTATAGGTGCAACCCATTTGGGCTATAATTCACAAGACCTTGTTTTTGCAAAATATGGACCTAAATGGAAACTACTTAGGAAGCTAACAACCTTACACATGCTTGGTGGAAAAGCCCTTCAAAGTTGGGGTAATGTGAGAGAAAAGGAGGTGAAAGACATGGTGAGATCCATTCATGAGTTAGGAATAAAAGGTGAACCAATTGAGATTGGTGATTTGTTGAGTTGTGCAATAACAAATATGGTGAGTCAAGTTATACTAAACAAACGTATATTTGCAAATAAAGGACAAGAGTCAAAGGAGTTTAAGGAAATGGTTGTTGAATTCATGACAATTTCTGGTGTCAATATCGGTGATTTTGTACCTTTTATTGGTTGGATCGATTTAGAAGGTGTGGTTAGTAAAATGAAACGTTTGCATAAGAAGTTTGATGTGTTTTTGACTAAAATGATTGAAGATCATGTGAAGTGTGCTCATGAACGTAAAGATAAACCAAATTTTTTGGATATTTTGATGGAAAATGGTAATGATCATTTTGGTGAGAGATTGAGTTTGTCCAACATCAAAGCTCTCTTATTGAATTTGTTCACTGCAGGGACAGATACATCATCTAGCATCATAGAATGGGCACTTGCTGAAATGCTAAGAAACCCAAACATCTTTTCCTTTGTCGGCTATGGTTATTCCGCGGTTGGTGGCGAATGTTTATGTTTGAGAAAGTTATTCTTACCCTCTCAATAG 1056 0.3684 MTFDLFLLRDIGISLFIFLISHFSISLILKNTSKNLPPGPKGWPILGVLPHLGTMPHVTLANMAKKFGPIMYLKMGTCDTIVASSPKVARAFLKTLDHNFLNRPTIIGATHLGYNSQDLVFAKYGPKWKLLRKLTTLHMLGGKALQSWGNVREKEVKDMVRSIHELGIKGEPIEIGDLLSCAITNMVSQVILNKRIFANKGQESKEFKEMVVEFMTISGVNIGDFVPFIGWIDLEGVVSKMKRLHKKFDVFLTKMIEDHVKCAHERKDKPNFLDILMENGNDHFGERLSLSNIKALLLNLFTAGTDTSSSIIEWALAEMLRNPNIFSFVGYGYSAVGGECLCLRKLFLPSQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01616 351 SUPERFAMILY Cytochrome P450 37 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 Pfam Cytochrome P450 37 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 Gene3D Cytochrome P450 28 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01616 351 PANTHER CYTOCHROME P450 FAMILY 1 16 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01616 Trre-Chr5 11755624 11757344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01616 30 326 Cytochrome P450 AT5G07990 45.545 2.32e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01616 K13083 - qsu:112039568 426.787