Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01589 ATGGCTATTCTTCCTTTCATACTCATTATTACTAAGCTACTTTTATTCTTCTCCAAATTTTCCTTTGCAACAGATACCATTACACAATCACAGTCACTTCCAGATGAAAGCACCTTGGTTTCTAAGGGTGGAATATTTGAGTTGGGTTTCTTTAGTCTTGGTGATTCCACAAACCGCTATGTTGGAATCTGGTACAAAAATATTCCTATTAGAAGAGTTGTTTGGGTCGCTAACCGTGACAATCCGATTAAAGACAATTCTAGCAAGTTGATTATAAGTCGAGATGGAAACCTTGTGCTTCTAAATCAAAATCAAACTCTTCTATGGTCAACAAACATAACTACAAAAGTTGCAATTTCAAGTCTAATTGTGCAACTTTTGGATGATGGAAATTTAGTACTTAAAATCGAGAAGCGGAACAACGTTGATGAAAATTTTCTATGGCAGAGTTTTGATCATCCTAGTGACACAATATTGCCAGGAATGAAGATTGGATGGGATAAAAAACGGGGACTTGATAGGCGTCTCACGGCATGGAAAAATTGGAATGACCCATCTTCAGGTGAGCTTACTTCAGTTATGGTATTAACTCCTAATCCTGAAACCTTTATTTCGAAAGGCTCGACAAAACTCTATAGGACAGGACCATGGACTGGTCGTCGATCGAGTGGAATAATTGGATTGAGAGAAAATCCACTTTATAATTATGAATTTCTCAATAATAAAGATGAAGTATATTATATGTTTACACTCAAGAATAGCACAGTGGTTTCTATAATTGTTTTTAATGAAACCCTTTCTGTTCGTCAACGCCTTGTTTGGATTCAAGAATCCGAAACATGGAATGTTTACCAAACCTTACCGCAAGATAATTGCGATATGTACAATACTTGTGGAGCAAATGGAATATGTGTGCTTGATGCATCCCCTATGTGTCAATGTTTCAAGGGATTTAAGCCAAAATCGCCACAACAGTGGAGTGCAACAGATTGGACACAAGGATGTGTGCGTATTGGTAATTGGAGTTGTGAGGCCAAAGTCAATGATGGATTCGAAAGAATTCCTGGAATGAAATTGCCGGATACTGCACATTCTTGGATCGATGAGAAAATGACACTAGAAAATTGCAAGGCTAAATGTTTGGAAAATTGTTCTTGCAGTGCTTACTCAAGTTTAGACGCAAGTGGAGTAGGTAATGGTTGTTCGATCTGGTTTGGTGATCTATTTGACCTTAGAGTTTCACCTGCTGGACAAGACCTGTATATTCGAAGGGAAGCTTCAAATATCGGTAAAAATGGGCATACTAAAACGGTAGTATTGGCGGTTTCAATTACAGTTCCAACAATCCTTGTGATGTTATTGGCATTCACCTACATATATATAACAAAGGCGAAGTACAAAAGAGAGAAAGATGAAGACACACATGAAGATTTTGAACTACCTTTCTTTGATCGAGCTACAATATTGAAGGCAACAAAAAATTTCTCTCTTGATAACAAGCTCGGTGAAGGTGGTTTTGGATCCGTATACAAGGGTACATTGCTTAATGGACAAGAAATTGCTGTCAAAAGACTTTTAATGAGTTCAGGTCAAGGATTAAAGGAGTTTAAAAATGAAGTTATGTTATGTGCTAAACTTCAACACCGGAATCTTGTTAAGGTTGTCGGTTTTTGTATTGAAGGAGACGAGAAAATGTTGATTTATGAATATATGTCCAACAAAAGTCTTGATTTATTTCTTTTTGATTTTGGGATAGCTAGAATATGTGGAAATGATCAAATTGAAGGGAACACAAACAAAATAGTTGGCACATACGGTTACATGGCACCTGAATATGCTATTGATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGTGTATTATTATTAGAAATTATCAGCGGAAAGAAAAATAGAGCACATAACTACCAAGAACGCGATCAAAATCTTATTGGATATGCTTGGAGATTGTGGAAAGAAGGCACTCCTCTCAAATTGATTGATGATTATACAAAGGAATCATATATTGAATCTGAAGTATTGCGTTGCATTCAAATTGGTCTATTATGCCTACAACATGATCCTGATCATAGGCCAACCATGACATCTGTTATTTTGATGTTGAGCAGCGAAAGTACTTTATCTTATAATCTAAAGGATCCTGGTTTCTTAATTAAAAAGTTAACAGCTGAAGGAGAACCTTCTTCACAACAAATATCTAACTATTAA 2235 0.3606 MAILPFILIITKLLLFFSKFSFATDTITQSQSLPDESTLVSKGGIFELGFFSLGDSTNRYVGIWYKNIPIRRVVWVANRDNPIKDNSSKLIISRDGNLVLLNQNQTLLWSTNITTKVAISSLIVQLLDDGNLVLKIEKRNNVDENFLWQSFDHPSDTILPGMKIGWDKKRGLDRRLTAWKNWNDPSSGELTSVMVLTPNPETFISKGSTKLYRTGPWTGRRSSGIIGLRENPLYNYEFLNNKDEVYYMFTLKNSTVVSIIVFNETLSVRQRLVWIQESETWNVYQTLPQDNCDMYNTCGANGICVLDASPMCQCFKGFKPKSPQQWSATDWTQGCVRIGNWSCEAKVNDGFERIPGMKLPDTAHSWIDEKMTLENCKAKCLENCSCSAYSSLDASGVGNGCSIWFGDLFDLRVSPAGQDLYIRREASNIGKNGHTKTVVLAVSITVPTILVMLLAFTYIYITKAKYKREKDEDTHEDFELPFFDRATILKATKNFSLDNKLGEGGFGSVYKGTLLNGQEIAVKRLLMSSGQGLKEFKNEVMLCAKLQHRNLVKVVGFCIEGDEKMLIYEYMSNKSLDLFLFDFGIARICGNDQIEGNTNKIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNRAHNYQERDQNLIGYAWRLWKEGTPLKLIDDYTKESYIESEVLRCIQIGLLCLQHDPDHRPTMTSVILMLSSESTLSYNLKDPGFLIKKLTAEGEPSSQQISNY 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01589 744 CDD PAN_AP_plant 342 423 - -
Trre5g01589 744 SMART ntp_6 346 424 IPR003609 -
Trre5g01589 744 Gene3D - 18 151 IPR036426 -
Trre5g01589 744 Pfam PAN-like domain 343 411 IPR003609 -
Trre5g01589 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 590 715 - -
Trre5g01589 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 151 - -
Trre5g01589 744 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Trre5g01589 744 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Trre5g01589 744 ProSiteProfiles Protein kinase domain profile. 495 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01589 744 Gene3D Hepatocyte Growth Factor 342 419 - -
Trre5g01589 744 Pfam Protein tyrosine and serine/threonine kinase 582 707 IPR001245 GO:0004672|GO:0006468
Trre5g01589 744 Pfam Protein tyrosine and serine/threonine kinase 496 580 IPR001245 GO:0004672|GO:0006468
Trre5g01589 744 SMART blect_4 30 154 IPR001480 -
Trre5g01589 744 Pfam D-mannose binding lectin 73 180 IPR001480 -
Trre5g01589 744 SUPERFAMILY Protein kinase-like (PK-like) 478 712 IPR011009 -
Trre5g01589 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 570 - -
Trre5g01589 744 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Trre5g01589 744 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Trre5g01589 744 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Trre5g01589 744 CDD B_lectin 30 154 IPR001480 -
Trre5g01589 744 Gene3D Phosphorylase Kinase; domain 1 458 566 - -
Trre5g01589 744 Gene3D Transferase(Phosphotransferase) domain 1 567 722 - -
Trre5g01589 744 PIRSF SRK 582 743 IPR024171 GO:0004674
Trre5g01589 744 PIRSF SRK 1 582 IPR024171 GO:0004674
Trre5g01589 744 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Trre5g01589 744 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01589 Trre-Chr5 11596570 11599441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01589 440 739 Receptor kinase-like Gene Family AT4G23190 42.547 5.76e-82 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g01589 PK_Tyr_Ser-Thr 5.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01589 - - tpra:123915292 1114.75